Rhizobium etli CFN 42: RHE_PF00297
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Entry
RHE_PF00297 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, substrate-binding protein
KO
K17241
alpha-1,4-digalacturonate transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PF00297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00297
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
RHE_PF00297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABC94187
UNAM_f:
RE1PF0000297
RhizoBase:
RHE_PF00297
UniProt:
Q2JYZ9
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All DBs
Position
p42f:332503..333786
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AA seq
427 aa
AA seq
DB search
MKGYLSGAFALALATVSLAWSSTAMAETKTITFLFTDDDQAYVERMEALSKEFETAHPDV
KVNFVSSGYDAVAKQLPVQLAVGEGPDIAKITDWQLAPYYLDMRPYMKDPDGFAKLHGDS
LNTLRFPGVNDPNSINGYIASQTFNLPFVNKTLFEQANEPLPKPTATLKEIVEASARVAK
ATGAQIPFTMDRSGHRFSGAAFSYGANYVKDGKFFFPDDAAKRYITDLYNWTKDGSFPKE
MWGAAGGTQYKNMGDEFVNGNVVTYLAGNWMVNPFQKKIADSFDWTAISAPCGDAGCYAM
PGGTAIVGFKRTKYPEAVAAFIEFLGSEKVQREIAENYVILTGADIKDPQYKLESKNAKD
AMAVFLGSRNSVPQAARDLERLKGSSAVYQLIVQRMSQLIVGELSLDDTFKAMSADVDKI
NGALAAK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggtatctatcaggggctttcgcactggcgttggcgactgtttccctcgcttgg
tccagcaccgccatggcggaaaccaagacgatcaccttcttgttcaccgatgacgatcaa
gcctacgtcgagcggatggaagcgctgagcaaggaattcgaaacggcgcatccggacgtc
aaagtcaacttcgtctcttcgggctatgatgcagtcgccaagcagctgccggtacagctt
gctgtcggcgagggtcccgacattgccaagatcaccgattggcagcttgcgccctattat
ctcgacatgcgcccctacatgaaggacccggacggcttcgccaagctgcacggcgacagc
ctgaacacgcttcgcttccccggcgtcaacgatccgaactcgatcaacggctatattgcc
tcgcagaccttcaacctgcccttcgttaacaagacgctcttcgaacaggcaaacgaaccg
cttccgaagccgaccgccacgctgaaggagatcgtcgaggcctccgcccgcgtcgccaag
gcgaccggcgcccagatccccttcacgatggaccgctcgggccatcgcttctcgggtgct
gccttctcctacggcgcgaactacgtcaaggacggcaagttcttcttcccggacgatgca
gccaagcgctacattacggatctctataactggacgaaggacggctctttcccgaaggaa
atgtggggtgcggccggcggaacccagtacaaaaacatgggcgacgagttcgtcaacggc
aatgtcgtgacctatctcgccggcaactggatggtcaatccgttccagaagaagatcgcc
gactccttcgattggaccgctatcagcgcgccttgcggcgatgccggctgctacgcaatg
ccgggcggcaccgcgatcgtcggcttcaagcgcaccaaatatcccgaagccgtcgccgcg
ttcatcgagttcctcggctctgaaaaggtccagcgcgaaatcgccgaaaattacgtcatc
ctgaccggcgctgacatcaaggacccgcaatacaagctcgagagcaagaacgccaaagac
gccatggccgtcttcctcggaagccgcaacagcgtgccgcaggcggcccgtgacctcgaa
cgtctcaagggatcctcggccgtgtaccagctgatcgtccagcggatgagccagctgatc
gtcggtgaactttccctcgacgacaccttcaaggccatgagcgccgacgtcgacaagatc
aacggggcgcttgccgccaagtaa
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