Rhizobium etli CFN 42: RHE_PF00321
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Entry
RHE_PF00321 CDS
T00317
Name
(GenBank) putative sugar ABC transporter, substrate-binding protein
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00321
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
RHE_PF00321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_11
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ABC94211
UNAM_f:
RE1PF0000321
RhizoBase:
RHE_PF00321
UniProt:
Q2JYX5
Structure
PDB
LinkDB
All DBs
Position
p42f:360257..361531
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AA seq
424 aa
AA seq
DB search
MYLDNFGRRVKLAVASFTLAATTAGAALAQEAVTLKWALWDWDKTAYYKPLIEAYQAKHP
NVKFEPMDLGSQDYQQMISTQLTGGSKDIDIVTIKDVPGYTNLVRAGNIADLSGFVKDQK
IDPAPYGGLIEELTIDGKIYSLPFRSDFWIVYYNKDIFDKAGVPYPTNDMTWAQFDETAE
KLAGGMGTNKTYGALLHTWRSTVQLPGILDGKHTLVDGDYAFLKPWYERALTLQKDGAIP
SYAFLKTSNTHYSALFFNGTIGMLPMGTWFVGTQIAKVKSGESKSKNWGIVKFPHPDGVP
AGTTAAQISGLAVNSNSQHKDAALDFIKFVAGPEGAAVVAATGTFPALKTADVSAKIAST
PGFPQDEASKEALIPAKAYLEMAVNPNAAKIEVVLNRAHDAIMTDNTSVDDGLKEMTEGV
KAIK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtatttggataatttcgggaggagggtgaaacttgccgtggcaagtttcactctggcc
gcgacgacggcaggcgcagcacttgctcaggaggccgtgacgctgaaatgggctttgtgg
gactgggacaagacagcctattacaagccgctgatcgaggcctatcaggccaagcatccg
aacgtgaagttcgagccgatggatctcggctcgcaggattatcagcagatgatctcgacg
cagctgaccggcggctcgaaggatatcgacatcgtcacgatcaaggacgtaccgggctat
accaatctcgtgcgcgccggcaatattgccgatctcagcggcttcgtgaaggatcagaag
atcgatccggcaccctatggcggcctgatcgaggagctgaccatcgacggcaagatctat
tcgctgccgttccgctccgacttctggatcgtctattacaacaaggacattttcgacaag
gcgggcgtgccctatcccaccaatgacatgacctgggcgcagttcgacgagaccgccgag
aagcttgccggcggcatgggcaccaacaagacctatggcgcgctgctgcatacctggcgc
tccaccgtccagctgcccggcatcctcgacggaaaacatacgctcgtcgatggcgactac
gctttcctgaagccctggtacgagcgcgcgctcaccctgcagaaggatggcgccatcccc
tcctatgccttcctgaagacatcgaacacgcattattcggcgctcttcttcaacggcacg
atcggcatgctgccgatgggcacatggttcgtcggcacccagatcgccaaagtcaaatcg
ggtgaatcgaagagcaagaactggggcatcgtgaagttcccgcatcccgatggcgtgccg
gccggcaccacggccgcgcagatctccggtctggcggtgaactccaattcccagcacaag
gatgccgcgcttgatttcatcaagttcgtcgccggccccgagggcgcggccgtcgtcgcg
gcgaccggcaccttcccggcgctgaagaccgccgacgtcagtgccaagatcgcatcgacg
cccggcttcccgcaggatgaggccagcaaggaagcgctgataccggccaaagcctacctg
gaaatggccgtcaatccgaacgccgccaagatcgaggtggtgctcaaccgcgcccatgac
gcgatcatgaccgacaacacctccgtcgatgacgggctgaaggaaatgaccgaaggcgtg
aaggccatcaagtaa
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