Rhizobium etli CFN 42: RHE_PF00352
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Entry
RHE_PF00352 CDS
T00317
Name
(GenBank) probable oligopeptide ABC transporter, permease protein
KO
K02033
peptide/nickel transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_PF00352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00352
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_PF00352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ABC94242
UNAM_f:
RE1PF0000352
RhizoBase:
RHE_PF00352
UniProt:
Q2JYU4
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All DBs
Position
p42f:394959..395909
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AA seq
316 aa
AA seq
DB search
MNNPILSLIASRLLIAVVTLIIVSFAVFFATTMLPGDTASILLGQAATPEAVEGLRKAMH
LDQPAFLRFVYWMIGLLSGDLGTSYANDMPIADLIGGRFANSMKLAGITALFAVPIALTL
GTTAAMMRGSLYDRAVTVLTIGVISVPEFMIATSAVLFFAVYLQWLPAISLTNEAKTFTD
MLRVYAMPVITLTFGVSAQMIRMTRAAVIETLNTPYAEMALLKGASRSRIVLKHALPNAL
GPIVNAVALSLSYLLGGVIIVETIFNYPGIAKLMVDAVATRDLPLVQTCAMVFCVGYLIL
ITLADIVAILSNPRLR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatccgatcctgtcccttatagcaagcaggctgctgatcgcagtcgtcacgctg
attattgtatccttcgcggtgttcttcgccacgaccatgcttccgggcgatacggcgtcc
atcctgctcgggcaggcggcaacgccggaggccgtcgagggactgcgcaaggcaatgcat
ctcgatcagccggcttttctccgcttcgtctactggatgatcgggctgttgtcgggcgac
ctcggcacgtcctacgctaacgatatgccaatcgctgacctcatcggcggccgctttgcc
aactcgatgaagctggcgggtatcaccgccttgtttgcggtgccgatcgcgctgacacta
ggcaccacagcagccatgatgcgaggatcgctctatgaccgtgcagtcaccgtgcttacg
attggcgtaatatcggtgcctgaattcatgatcgcgacgtcggccgtcctgttctttgcg
gtctatctgcaatggcttccggcaatctccctgaccaatgaagcgaaaacctttaccgat
atgctacgcgtctatgcgatgccggtgatcacactgaccttcggcgtatcggcgcagatg
atccgaatgacgcgggctgccgtgattgaaacgctgaacacgccctatgccgaaatggcg
ttgctgaaaggcgcctcacgcagtcgcatcgttttgaagcatgcattgccgaatgcactc
ggcccgatcgtcaacgcagttgcgctctcgctttcttatctgctcggcggcgtcatcatc
gtcgaaacgatcttcaactatcccggaattgccaagctcatggtcgatgcggtcgcaacg
cgagacctgcctcttgtccagacctgcgcgatggtcttctgcgtcggctacctcatcctc
atcacgcttgccgacattgttgccattctttccaatccgaggctgcgatga
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