Rhizobium etli CFN 42: RHE_PF00364
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Entry
RHE_PF00364 CDS
T00317
Symbol
gabDf2
Name
(GenBank) succinate-semialdehyde dehydrogenase protein
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00250
Alanine, aspartate and glutamate metabolism
ret00310
Lysine degradation
ret00350
Tyrosine metabolism
ret00650
Butanoate metabolism
ret00760
Nicotinate and nicotinamide metabolism
ret01100
Metabolic pathways
ret01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RHE_PF00364 (gabDf2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RHE_PF00364 (gabDf2)
00310 Lysine degradation
RHE_PF00364 (gabDf2)
00350 Tyrosine metabolism
RHE_PF00364 (gabDf2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RHE_PF00364 (gabDf2)
Enzymes [BR:
ret01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RHE_PF00364 (gabDf2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RHE_PF00364 (gabDf2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RHE_PF00364 (gabDf2)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ABC94254
UNAM_f:
RE1PF0000364
UniProt:
Q2JYT2
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Position
p42f:complement(411689..413176)
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AA seq
495 aa
AA seq
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MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLAD
AAAAVDAAASAAESWRETAPRKRSEILRRCFELMVERSETLARLICLENGKALRDARGEV
AYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGVCVLITPWNFPAAMATRKIAP
ALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEA
CTAANRIYVQSGIHDDFAEKFARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAI
SRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIFGPVAPLYRFETEAEVIAAAN
NTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
GIAEFMEAKYIATSF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaacaagacttctccaaatctagactacgatcccttcgcgctcaactcgttt
tcccgcggcctctatattggcggggtctggcggcctgcaggcggcgagggttggatccag
gtgatcgatcccgcgacggaggtcgtcattgccgccgtgccggatgcgggccttgcggat
gcggcagccgcggtggatgccgcggcgagcgccgcggagagctggcgcgagactgcgccg
aggaagcggtccgagatactacgccgctgcttcgaacttatggtggagcgctccgaaacg
cttgccaggctcatttgtctcgaaaacggaaaagcgttgcgcgacgcgcgcggcgaggtg
gcctatgcggcggagttctttcggtggaacgctgaggaggcggtgcgcatctcgggtgag
ttcggcattgcgccggccggtggaaaccggatcgtcgtcgattaccagcctatcggcgtc
tgcgttctcatcacaccctggaatttcccggccgccatggcgacccgcaagattgcgccc
gcccttgccgccggctgcaccgtcatcctgaagccggcgagcgagactccgttgacggcc
tatgcgcttgcggctctctacgaggaggccggggtgccgcggggcgtcgtgaacgtgatg
acgacatcgacgcctggccctgtcatcgccgccatgctggccgacccgcgggtgcgaaaa
ctctccttcacaggctcgacgggcgtcggtcgcacgcttctggcggaagcggcgaaaaat
gtgatctcctgctcgatggaactcggcggcaacgcgcctttcatcgtattcgacgacgcc
gacattgacgcggcgatcgaggggctgatggtggcgaaaatgcgcaatgccggtgaggcc
tgcacggctgcgaaccgcatttatgtccaatccggtatccacgatgacttcgcggaaaaa
tttgcacgacgcatggccgccctcagggtcggccccggcgtaaatgcggataccgcatgc
ggtccgatgatcacacgcaaggcggtggagaagatcgagcgcctggttgcggacgccatt
tcccgcggcgcgcgcgcgctctgcggcggacgaacattggcgggacggggctttttctat
ccgccgacggtgcttgtcgatgtttccccggccgcggacttgggctgtgaggagattttc
ggtcctgttgcgccgctctatcgtttcgagaccgaggcagaggtcattgctgccgcgaac
aatacggagtatggcctcgccgcctacatctatacccgcgacatcggccggggcttgcgc
gtcgcctcaaaggtcgaggcgggcatgatcgcgctcaatcgaggactggtctccgatccc
gctgccccctttggcggcgtgaagcagagcggcctcggacgtgaaggagggcagcatcac
ggaatcgcagagttcatggaagccaagtacattgccacaagcttctga
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