Rhizobium etli CFN 42: RHE_PF00460
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Entry
RHE_PF00460 CDS
T00317
Symbol
vbsD
Name
(GenBank) efflux transporter inner membrane protein
KO
K26937
MATE family, multidrug efflux pump
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00460 (vbsD)
Transporters [BR:
ret02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
RHE_PF00460 (vbsD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ABC94350
UNAM_f:
RE1PF0000460
UniProt:
Q2JYI6
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All DBs
Position
p42f:519260..520678
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AA seq
472 aa
AA seq
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MNDMSEMSGSLRKGRLAPEDLASPHLFRLLLRLGLPAMFGLSINAAHHTINMIFVGMIGE
DQIAAIMIVLPVLMLVAAFGEGIGVGVATEVGRALGAGNRSRASTLASVSLAAGVAFGAA
SAVAIAAFPSVLLFGATSAIEPLAQHYLLVIVVSIPLTMAQIILDFLAIAEGNARFSMWT
LVACFALNIILDPIMIFGFGLGLQGAAMATILSQLVALSIYGAYHARRLGTIRLTFGWPF
GDLRHLKAVLAVGAPTTLTSLATAGAIAAMLSVAGTYHGEDGIAGVGIALRLLAVGALPV
IGISLGAQSILSFAWGRGDISRVLAAARMLSVVTSAVGGVYGLAAIIFSERLAAFFTDEA
SVLSIAGQAIVATHLPFLLFGLRQTVLILFQAQGRPNAALAVGLAQNGYLLFPLLALLPP
FFGFSGLLWAMFLASALTGLLSCFCLARSLGALRQRSDEPLTSIRPYPRFCP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgagcgagatgagcggcagcctgcggaaagggcggcttgcgccggaagat
cttgccagcccgcaccttttcaggctgctgctgcggctcgggctgcccgccatgttcggc
ctgtcgatcaacgccgcccaccacacgatcaacatgatcttcgtcggcatgatcggcgaa
gaccagatcgccgcgatcatgatcgtgctgccggtcctgatgctcgtcgccgctttcggc
gaaggcatcggcgtcggtgtggcgaccgaggtcgggcgcgcactcggcgccggcaaccgg
tcgagagccagcacccttgcctcggtcagccttgccgccggcgtcgccttcggcgccgca
agcgcggttgcgatcgcagcctttccctcggttctgctgttcggcgccacatcagcgatc
gagccgctggcacagcattatctcctcgtcatcgtggtctcgattccactgacgatggcg
cagatcattctcgactttctggcaatagccgagggcaatgcccgcttcagcatgtggacg
ctcgtcgcctgcttcgcgctgaacatcatcctcgacccgatcatgatctttggcttcggt
ctcggcctgcagggcgcggcgatggcaaccatcctctcccagctcgtggcgctctcgatc
tacggcgcctatcatgcgaggcggcttgggacgatccgactgacgttcggctggccattc
ggcgacctcaggcatctcaaggcggtccttgctgtgggcgcaccgacgacgctgacgagc
ctcgcgacggcgggcgcaatcgctgcgatgctgtcggtcgccggcacctatcacggtgaa
gacggcatcgccggcgtcggcatcgccttgcggctgcttgcggtcggcgctttgccggtc
atcggcatttcgctcggggcgcagtccatcctgagctttgcctgggggcgcggggatatc
tcccgggtgctggcggcagcccgcatgctctcagttgtcacgagcgcggtcggcggcgtc
tacgggctggcagcgatcatcttttccgagcgtcttgccgcgtttttcaccgacgaagct
tccgtgctttcgatcgccggccaggcgatcgtcgcaacccatcttcccttcctgctgttc
ggcctccggcagaccgtgctgatcctcttccaggcgcagggcaggccgaacgccgccctt
gccgtcggcctggcgcagaacggatatcttctctttccgctgcttgcgctgctgccgccc
ttcttcggattctccggcctgctctgggccatgttcctggcttcggcgctcactggcctg
ttgtcatgcttctgcctcgcccgatccctcggcgcgctccggcagcgctcggacgaacct
ctgacatcaatccgtccctatccccgcttttgtccatga
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