Cupriavidus pinatubonensis JMP134: Reut_A0039
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Entry
Reut_A0039 CDS
T00268
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
reu
Cupriavidus pinatubonensis JMP134
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
reu03009
]
Reut_A0039
Enzymes [BR:
reu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Reut_A0039
Ribosome biogenesis [BR:
reu03009
]
Prokaryotic type
rRNA helicases
Reut_A0039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
CMS1
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
AAZ59421
UniProt:
Q477L2
LinkDB
All DBs
Position
1:52533..53957
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AA seq
474 aa
AA seq
DB search
MNTSSLPPQAGAAAPAADFSTLPLAPATLATLAQLGYDEMTPIQAASLPLTLAGHDLIAQ
AKTGSGKTAAFALALLHRLDARRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTL
CGGSPMRPQVDSLVHGAHVVVGTPGRILDHIDRGSLELSAINTLVLDEADRMLDMGFFDD
ISYVASRCPRERQTMLFSATYPAGIDKLSQKFLRKPQEVKLAEKHDSSSIRQYFYEVDES
ERLSAVGRLLDHFRPASTLAFCNTKARCRDLVDLLRGQGFQALALHGDLEQRDRDQVLVQ
FANGSCSVLVATDVAARGLDIAQLEAVINVEITPDPEVHIHRIGRTGRAGEEGHAFSLVS
MDEMGRVGNLEQHHGGEFEWHPLAELRAASTERLLPPMVTLQMLGGRKEKIRPGDILGAL
TGEAGFTKEQIGKINVMEMSTYIAVDRAIGREAVRRLNAGKVKGKKVKVRMLTE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaagctccctgcccccgcaagccggcgctgccgcgcccgccgccgatttctcc
accctgcccctggcgccggccacgctcgccacgctggcccagctcggctatgacgaaatg
acgccgatccaggccgcgagcctgccgctgacgctcgccggccacgacctgatcgcgcag
gccaagaccggcagcggcaagaccgctgccttcgcgctggcgctgctgcacaggctcgat
gcgcgccgcttcgacgtccaggcgatggtgctgtgcccaacgcgcgagctggccgaccag
gtcacgcaggaaatccgccgcctcgcacgggccgaagagaacgtgaaggtgctgacgctg
tgcggcggctcgccgatgcgcccgcaggtggacagcctggtccacggcgcgcacgtcgtg
gtgggcacgccgggccgcatcctcgaccatatcgaccggggcagcctcgaactgtccgcg
atcaacacactggtgctcgacgaagcggaccgcatgctcgacatgggctttttcgacgac
atctcgtatgtggccagccgctgcccgcgcgaacgccagacgatgctgttttcggccacg
tatccggcgggcatcgacaagctcagccagaagttcctgcgcaagccgcaggaggtgaag
ctggccgagaagcacgacagctcgagcatccgccagtatttctatgaagtcgatgagagc
gagcgtctcagcgccgtgggccgcctgctcgaccatttccgcccggccagcacgctggcc
ttctgcaataccaaggcgcgctgccgcgatctggtcgacctgctgcgcggacagggcttt
caggcgctggccttgcacggcgacctggagcagcgcgaccgcgatcaggtgctcgtgcag
ttcgccaacggcagctgctcggtgctggtagcgacggacgtggccgcgcgcgggctggat
atcgcccagctcgaagccgtgatcaacgtggaaatcacgcccgaccccgaagtgcatatc
caccgcatcggccgcactggccgcgccggcgaggaaggccacgcgttcagcctggtcagc
atggacgagatggggcgcgtaggcaacctggagcagcaccacggcggcgaattcgaatgg
cacccgctggccgaactgcgcgccgcgagcaccgagcgcctgctgccgccgatggtcacg
ctgcagatgctgggcggccgcaaggaaaagatccggcccggcgatatcctcggtgcgctg
accggcgaggccggcttcaccaaggaacagatcggcaagatcaatgtgatggagatgtcg
acctacatcgcggtggatcgcgccatcgggcgagaagcggtgcgccggttgaacgcgggg
aaggtgaagggcaagaaggtgaaggtgaggatgctgaccgagtga
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