Cupriavidus pinatubonensis JMP134: Reut_A0355
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Entry
Reut_A0355 CDS
T00268
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu02020
Two-component system
reu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Reut_A0355
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Reut_A0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
reu03021
]
Reut_A0355
Transcription machinery [BR:
reu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Reut_A0355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AAZ59737
UniProt:
Q476E6
LinkDB
All DBs
Position
1:complement(384623..386104)
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AA seq
493 aa
AA seq
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MKPSLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVEQALTENPLLERENDWIESPLRV
AADGSVNLQSAPAPAPAEPQGNGEANADSARGSDDENYTDSGGDDYGSDWSLDDFARRPQ
GEDDEKTPMQLRDAEPTLREHLMEQLTPLKISLRDKGLAIFLIESLDDDGYLSTSLDEIC
SELPEELEFEVDEVQAMLTLLQSFDPAGVGARNAAECLSLQLRRLQHPQRELALSIVQHH
LELLAVRDYTRLKKALQVDEAALKAAHELIRSLAPYPGHAYSRPEADFVVPDVFVRKSGS
SWIAQLNPDVMPRLRINDMYAQILRGAKGESGAAGLQQKLQEARWLIKNIQQRFDTILRV
SQAIVERQKNFFTHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPMGTFELKYFF
GSHVSTETGGAASSTAIRALIKQLIGAEDPRSPLSDSRIAELLGEQGFVVARRTVAKYRE
ALKIPAVNLRKTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtcgctccagctccgcctttcgcagcatctggcactcacgccgcaactgcag
cagtcgatccgactgctgcaactctcaacgctggaactgcaacaggaagtcgagcaggcg
ctcacggagaacccgctgctggagcgcgaaaacgactggatcgaaagtccgctgcgcgta
gcggcagatggctcggtcaacctgcaaagtgccccggctcccgctcctgccgaaccgcag
ggcaatggcgaagcgaatgccgacagcgcacgcggcagcgatgacgagaactacaccgac
agcggcggtgacgactacggcagcgactggagcctcgacgatttcgcgcggcgcccccag
ggcgaggacgacgaaaagacgcccatgcagctgcgcgatgccgagcccacgctgcgcgaa
catctgatggaacagctcacgccgctgaagatttcgctgcgcgacaaggggctggcgatc
ttcctgatcgaatcgctcgatgacgacggctacctgagcacgtcgctcgacgagatctgc
tcggaactgcccgaggaactcgaattcgaagtcgacgaagtccaggccatgctcacgctg
ctgcagagcttcgacccggcgggcgtgggcgcgcgcaatgcagccgaatgcctgagcctg
caattgcgccggctgcagcacccgcagcgcgaactggcgctgtcgatcgtccagcatcat
cttgaattgcttgcggtgcgcgactacacgcgcctgaaaaaagcgctgcaggtggacgaa
gcggcgctaaaagccgcgcatgaactgatccgttcgctcgcgccgtatcccgggcatgcg
tatagccggcctgaagcggatttcgtagtgcccgacgtgttcgtgcgcaagagcggcagc
agctggattgcacagctgaacccggatgtgatgccccgcctgcgcatcaacgacatgtac
gcgcagatcctgcgcggagcgaagggggaatccggcgctgccgggctgcagcaaaagctg
caggaggcacgttggctgatcaaaaatattcagcaaaggttcgacacaatcctgcgagtt
tcacaggcaattgtcgaacgtcagaagaactttttcacgcacggcgaaatcgcgatgcgc
cccttggttttgcgggagattgccgatacactgggattacacgagtcaaccatatcccgg
gtgacgaccaataaatacatggcaacgccgatgggtactttcgaactgaagtacttcttc
ggtagccacgtgtccaccgaaaccggtggcgcggcttcatcaacggcgatccgcgccttg
atcaagcaacttataggagccgaagacccgaggagtcctctttccgacagccgaattgcc
gaattgctgggtgaacaaggcttcgttgtcgcgcgccgtaccgtcgccaagtatcgcgaa
gccctgaagatccccgctgtcaatctccgcaagactttgtag
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