Cupriavidus pinatubonensis JMP134: Reut_A0517
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Entry
Reut_A0517 CDS
T00268
Name
(GenBank) Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Reut_A0517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
reu03019
]
Reut_A0517
Enzymes [BR:
reu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Reut_A0517
Messenger RNA biogenesis [BR:
reu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Reut_A0517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25_NTPase-like
P-loop_SecA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AAZ59899
UniProt:
Q475N4
LinkDB
All DBs
Position
1:562619..564139
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AA seq
506 aa
AA seq
DB search
MSFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPML
QLLSESAPQRQGKPAVRALVLTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIE
QLRRGVEIVVATPGRLLDHVSQRTIDLSSVELLVLDEADRMLDMGFIHDIRKILNVLPPK
RQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV
REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLV
ATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDI
ERLIKRKLEQTVLTGFEVDPTIAAEPIQKGRQQRGGGQGGGQGGGRGRAQAKPAAPAAAK
PSQGQPRQRPAQNAPRGASQAGGEAARGHGGANRNAGQAQPRNPQRNGGGQARPAQDATG
APARNNNRRPASQAALLGGARAKPAR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccgaactcggcttgtccgacaagcttgtgcgggccgtggccgaacagggc
tacaccacccccacccccatccaggcccaggcaattcccgccatcctcaaaggtggcgac
ctgcttgccggcgcgcagaccggtaccggcaagacggcaggctttacgctgccgatgctg
cagctgctgtccgaatcggcgccacagcgccagggcaagccggcggtgcgcgcactggtg
ctgacgccgacgcgtgaactggccgcgcaggtggaagaaagcgtgcgcaactacggcaag
tacgtgcggttgcgctcgatggtcatgttcggcggcgtgggcatcaacccgcagatcgaa
cagctgcgccgtggcgtggaaatcgtcgtggcaacgccgggccgcctgctggatcacgtg
tcccagcgcacgatcgacctttccagcgtggaactgctggtactcgatgaagccgaccgc
atgctcgacatgggcttcatccacgacatccgcaagatcctcaacgtcctgccgcccaag
cgtcagaacctgctgttctcggcaacgttctcggatgatattcgcgcgctggcggaccgc
ctgctgaacaacccggcatcgatcgaggtcgcgcgccgcaacaccacggccgaaaccgtg
gcgcagcgcgtctacccggtggaccgcgaacgcaagcgcgaactgctcgcccacctggtg
cgcgagcatgactggcaccaggtgctggtcttcacgcggaccaagcacggcgccaaccgg
ctcgccgagcagttgaccaaggacggcctgtccgcgctggcgatccacggcaacaagagc
cagtcggcgcgcacgcgcgcgctgtccgagttcaaggccggcacgctgcggctgctggtg
gccaccgatatcgccgcgcgcggcatcgacatcgaccagttgccgcacgtggtcaacttc
gacctgcccaacgtgccggaagactacgtgcaccgcatcggccgtaccggccgcgccggc
gcagagggtgaggcgatctcgctggtctgcgtggacgagcatggcctgctgcgcgacatc
gaacgcctgatcaagcgcaagctcgaacagacggtgctgacgggcttcgaagtcgatccg
accatcgcggcggagccgatccagaagggtcgccagcagcgaggcggcgggcagggcggt
ggacaaggtggtggacgtggccgtgcgcaggcaaagcctgcggcgccagcggcagccaag
ccgtcgcagggccagccgcgtcagcgcccggcccagaacgcaccgcgtggcgccagccag
gccgggggcgaggcagcccgtggccacggcggcgcaaaccgcaacgccggccaggctcag
ccgcgcaacccgcaacgcaacggcggcggccaggcgcggcctgctcaggacgccactggc
gccccggcgcgcaacaacaaccgccgcccggcctcgcaggccgcactgcttggcggcgcg
cgggctaagccggcgcgctga
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