Cupriavidus pinatubonensis JMP134: Reut_A1074
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Entry
Reut_A1074 CDS
T00268
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03410
Base excision repair
reu03430
Mismatch repair
reu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Reut_A1074
03430 Mismatch repair
Reut_A1074
03440 Homologous recombination
Reut_A1074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reu03400
]
Reut_A1074
DNA repair and recombination proteins [BR:
reu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Reut_A1074
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Reut_A1074
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Reut_A1074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AAZ60452
UniProt:
Q473I1
LinkDB
All DBs
Position
1:complement(1164234..1165931)
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AA seq
565 aa
AA seq
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MTRIAIRTYSAEHANTLAAAGLHPTLARILSARGVAQPSELSTELPGLVPPSAMKGIGHA
AEYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAAKQQPDVIVTVDNGIASVDGVAAANAAGIDVVVTDHHLPGSELPPAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLMALRAELRKRGVYTQQTQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLKRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDANRAWEIAQELDGMNRERRDIEAGMQQEALQILEQPLAGPDPSSRFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDETTVKGSGRSIPGFHLRDALDLVSKRCPGM
MVKFGGHAMAAGLTVHADRFAEFQEAFEAVGKEWLSDEQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGKQRFDAIWFNHADELGASA
QIAYRLDNNTFNGITRVQLVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggattgccatccgcacctattccgccgagcacgccaataccctggcggccgcc
ggcctgcacccgaccctggcccgcatcctgtccgcgcgtggcgtggcgcagccgtccgaa
ctctccaccgaactgccggggctggtaccgccttcggccatgaagggcatcggccatgcc
gccgagtacctggccgacgcgatcgcggcaggcaagcgcctgctgatcgtcgccgactat
gactgcgacggcgcgaccgcctgcgcggtcggtgtgcgcgggttgcgcatgctgggcgcg
cgcgtcgagtacatcgtcccgaaccgcttcgagtacggctacggactgacgccggagatc
gttgcgctggctgcgaagcagcagcccgatgtgatcgtcaccgtcgacaacggcattgcc
agcgtcgacggcgtcgcagccgccaacgcggccggcatcgacgtggtggtgaccgaccac
cacctgcctgggtcggaactgcccccggccgcggtgatcgtcaacccgaaccagcccggc
tgcgaattcccgagcaagaacctggccggcgtgggcgtgatgttctacgtgctgatggcg
ctccgcgccgaactgcgcaagcgcggcgtctacacgcagcaaacccaaccgccgctgcag
acgctgctggatctggtcgcactgggcacggtggccgacgtggtcaagctcgacaccaat
aaccgcatcctggtcgcacagggcctgaagcgcatgcgcgcgggccgcatgcagccgggc
gtggcagcgctgttccgtgccgcgggccgggaagccgcgcgcgccaataccttcgacctt
ggcttcgggctgggcccgcggctcaatgccgcggggcgccttgccgacatgtcgcttggc
atcgaatgcctgctgaccgacgatgccaaccgcgcttgggagatcgcgcaggaactggac
ggcatgaaccgcgagcggcgcgacatcgaggcgggcatgcagcaggaagcgctgcagatc
ctcgagcagccgctggccggccccgatccgtcatcccgctttacggtcagcgtgttcaac
gacacgtggcaccagggcgtgatcggcatcgtcgcatcgcgactgaaggacaagttccat
cgcccgaccatcacgttcgcgcccggcgacgagaccaccgtcaagggctctggccgctcg
atccccggcttccacctgcgcgatgcgctcgacctggtatccaagcgctgcccgggcatg
atggtcaagttcggcggccacgccatggcggccggcctgaccgtgcatgccgatcgcttt
gccgagttccaagaagcgtttgaagccgtcggcaaggaatggctcagcgacgaacaactc
gcgcgcgtgatcgagaccgatggcgatatcgaggaccagtgcttcagtccggaattcgtc
acgctgctcgaacagcaggtgtggggccagggctttccggcgccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtactcaagggcaagcacctgaagctgcaactggggcgc
ggcaagcagcgcttcgacgcgatctggttcaaccacgccgacgaactcggcgcgagcgcg
cagatcgcctaccggctcgacaacaacaccttcaatggcatcacgcgcgtgcagctcgtg
atcgagcacgcgcagtaa
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