Cupriavidus pinatubonensis JMP134: Reut_A3186
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Entry
Reut_A3186 CDS
T00268
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Reut_A3186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
reu03019
]
Reut_A3186
03400 DNA repair and recombination proteins [BR:
reu03400
]
Reut_A3186
Enzymes [BR:
reu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Reut_A3186
Messenger RNA biogenesis [BR:
reu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Reut_A3186
DNA repair and recombination proteins [BR:
reu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Reut_A3186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAZ62546
UniProt:
Q46WD7
LinkDB
All DBs
Position
1:complement(3486352..3488199)
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AA seq
615 aa
AA seq
DB search
MSQALAILKDVFGYHAFRGRQGEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGE
GVGIVVSPLIALMQDQVAALTEAGVRASVLNSTLTSSEASAVERDLLAGRLEILYVAPER
LMTPRFLDLLGRARVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
ALTRDEIIERLALDDARVFISSFDRPNIRYRIVEKDNARQQLLAFIKAEHMAADGTHDSG
IVYCLSRKKVEDTAEWLQGHGLNALPYHAGMDPGTRQRHQARFREEEGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADD
AFKRVSSSKLDALLGLCETAGCRRVRILAYFNETSEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDVLRGNASEKIKQWGHDKVSTFGIGKDRSVHEWHTVFRQ
LIAQGWLMIDHGGHGALLLGEGAREVLKGERQIILRRQASKPGKSGERAARGARTDHTAD
MDADTLANWEALRRWRTEAAREHGVPAYVIFHDATLAELARTAPGSLSAMEGIPGIGASK
LERYGQAIVDTLSRV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcactggcgatcctcaaggatgtattcggctaccacgccttccgtggccgc
caaggcgagatcatcgaccatgtcgcgacgggcggcgactgcctggtgctgatgcccact
ggcggcggcaagtcgttgtgctaccagattccggcgctgctgcgccagcgcgcaggcgag
ggcgtaggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggttgcggcgctg
accgaggccggcgtacgcgcctcggtgctcaattcgacgctgaccagttcggaggcctcg
gcggtcgaacgcgatctgctggctggcaggctcgaaatcctctatgtcgcgcccgagcgg
ttgatgaccccgcgctttctcgatctcctcggacgtgcccgcgtcggcctgttcgcgatc
gacgaggcgcattgcgtgtcgcagtggggccacgatttccggccggagtacatccagctg
tcggtattgcacgagcgcttcccggatgtgccgcgcatcgcgctgacggcgacggccgat
gcgctgacgcgcgacgagatcatcgaacggctagcgctcgacgatgcacgtgtctttatc
tcgagcttcgaccgtcccaatatccgctaccggatcgtcgaaaaggacaacgcgcgccag
caactgctcgccttcatcaaggcggagcacatggccgccgatggcacgcatgacagcggc
atcgtctactgcctgtcgcgcaagaaggtcgaggacaccgccgaatggctgcaaggccat
ggtctcaatgcgctgccgtaccacgctggcatggatccgggcacgcgccagcgccatcag
gcgcgcttccgcgaagaggaaggcctggtgatggtcgcgacgatcgctttcggcatgggc
atcgacaagcccgacgtgcgtttcgtcgcccatctggacctgcccaagagcatggagggg
tactaccaggaaaccggccgtgccgggcgcgacgggttgcctgccaatgcctggatggcc
tatggtctcggcgacgtggtccagcagaaacgcatgatcgacgagtccgaggccgacgac
gcgttcaagcgcgtctcgtcgtcgaagctcgatgcgctgctcggcctgtgcgaaaccgca
ggctgccggcgcgtgcgcatcctggcctacttcaacgaaaccagcgagccctgcggcaat
tgcgacacgtgcctggagccgcctgccacgtgggacggcacgcgcgaggcgcagatggcg
ctgtcgtgcgtgtaccgtacggcgcaggcgagccgggtgcacttcggcgccacccacctg
atcgatgtgctgcgtgggaatgcgtcggagaagatcaagcagtggggccatgacaaggtc
tcgaccttcggcattggcaaggaccgctcggtccacgaatggcacacggtgttccggcag
ctgattgcgcagggatggctgatgatcgaccacggcggccacggcgcgctgctgctcggc
gagggtgcgcgcgaagtgctgaagggcgagcgccagatcatcctgcgccggcaggcctcc
aagccgggcaagtctggcgagcgcgctgcgcgcggcgcgcgtaccgaccatacggcggat
atggatgccgacacgcttgcgaactgggaagcgctgcgccggtggcgcaccgaggccgca
cgcgagcacggcgtgccggcctatgtgatcttccacgatgccaccttggccgaactggcc
cgcacggcgccggggtcgctgtcggccatggagggcattcccggtattggtgcatccaag
ctcgagcgttatgggcaggcgatcgtcgacaccctgagcagggtgtaa
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