Candidatus Reidiella endopervernicosa: HUE57_09585
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Entry
HUE57_09585 CDS
T06650
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rev
Candidatus Reidiella endopervernicosa
Pathway
rev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE57_09585 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rev03019
]
HUE57_09585 (pnp)
03016 Transfer RNA biogenesis [BR:
rev03016
]
HUE57_09585 (pnp)
Enzymes [BR:
rev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HUE57_09585 (pnp)
Messenger RNA biogenesis [BR:
rev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUE57_09585 (pnp)
Transfer RNA biogenesis [BR:
rev03016
]
Prokaryotic type
tRNA degradation factors
HUE57_09585 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
QKQ26500
UniProt:
A0A6N0HVX3
LinkDB
All DBs
Position
1723991..1726075
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AA seq
694 aa
AA seq
DB search
MASIKKVFQYGKHSVTLETGEIARQASGAVMVSMGDTVVLATAVGMRKAIEGRDFFPLTV
DYQEKTYAAGKIPGGFFRREGRPSENETLTARLIDRPLRPLFPKGFTNEVQVILTVISLD
PEINPDIPALIGSSAALAISGMPFNGPVGAARVGYINSEYVLNPDMSELAESQLDLIVAG
TESAVLMVESEAKELPEDVMLGSVIYGHEQSQSVIAAIKEMAAEVNAPAWEWQAPEVDST
LADAVAAEGEAALTEAYQISEKMDRYDRLTQIRGEITEKLSAGDDANFSSDEVGGAVGKL
EKRIVRSRVIAGEPRIDGRDTKTVRPITIRTGVLPRTHGSALFTRGETQALVVTTLGTQR
DAQIIDALEGERKEHFLLHYNFPPYSVGETGRVGSPKRREIGHGRLAKRGVAAAMPSVED
FPYTVRVVSEITESNGSSSMASVCGSSLAMMDAGVPLKAPVAGVAMGLIKEENGFAVLTD
ILGDEDHLGDMDFKVAGTNDGVTALQMDIKIEGITQEIMEQALAQAKDGRLHILGEMNKA
ISSAREEMSDFAPRYLTFKINPDKIRDVIGKGGATIRALTEETGASIDLSDDGTVKVASS
DNNAAKEARRRIEQLTADVEVGVVYEGKVAKLMDFGAFVTILPGKDGLVHISQISNERVE
KVSDKLTEGDVIKVKVLEVDKQGRIRLSMKAVEA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtggcctcaatcaaaaaagtctttcagtacggtaagcacagcgtaactctggaaaccggc
gagattgcacgtcaggcaagtggcgcggttatggttagcatgggcgataccgtcgtgcta
gcaaccgccgttggcatgcgcaaggcgattgagggacgcgacttcttcccgcttaccgtc
gactatcaggagaagacctacgctgcgggtaagatcccaggtggcttcttccgtcgtgaa
ggacgcccgagcgagaacgagacgctcactgcacgactgattgaccgtccattgcgcccg
ctcttccctaagggcttcactaacgaagttcaggtgattttgaccgttatctctctcgac
cctgagatcaatcccgatattccagcgctgatcggttcgtctgccgcgctggctatctcg
ggcatgcctttcaatggtcctgttggtgcagcccgcgttggttatatcaacagtgagtac
gtacttaaccctgatatgagcgagctggctgagtcgcagctcgatctgatcgttgccggt
accgagagtgctgtgctgatggttgagtctgaggcgaaggagcttcctgaggacgtcatg
cttggttcggtcatctacggccacgagcagtctcagagcgtgatcgcagcgatcaaggag
atggccgctgaggtaaatgcccccgcatgggagtggcaggcacctgaggtcgatagcact
ctggctgatgccgttgctgccgagggtgaagcggctctgaccgaggcctaccagatcagt
gagaagatggatcgttacgatcgtctgacccagatccgcggcgagatcaccgagaagctg
agcgctggtgacgatgcaaacttcagcagtgatgaggttggcggtgcggttggtaagctc
gagaagcgcattgttcgaagccgtgttattgcaggtgagccgcgtatcgatggtcgtgat
accaagaccgttcgtccgatcaccatccgtaccggtgtactgccgcgtacccacggttct
gcactcttcacccgtggtgagacccaggcactggttgtgaccacccttggtacccagcgc
gatgcacagatcatcgatgcactcgaaggtgagcgtaaggagcacttcctgctacactac
aacttccctccctactcagtcggtgagaccggtcgcgttggtagccccaagcgtcgtgag
attggtcacggtcgtctggccaagcgtggtgtagcggcagcgatgccttcggttgaggac
tttccctacaccgtacgtgttgtctcagagatcaccgagtcgaacggctccagctccatg
gcaagtgtctgtggtagctcactggcgatgatggatgcgggtgtaccgctcaaggcgccg
gttgcaggtgttgcgatgggtctgatcaaagaggagaacggttttgcagttctgaccgat
atccttggcgacgaagatcacctcggcgatatggattttaaggtggccggaaccaatgac
ggtgttaccgcgctgcagatggatatcaagattgagggtatcacccaggagatcatggag
caggcgctggcacaggcgaaggatggtcgtctccatatcctcggcgagatgaacaaggcg
atcagttcagctcgcgaagagatgtctgactttgcaccacgctacctcaccttcaagatc
aaccctgacaagattcgtgacgttatcggtaagggtggtgcaaccatccgcgccctgacc
gaagagaccggtgcctctatcgatctcagtgatgatggcaccgttaaggttgcctcgagt
gacaacaacgccgccaaagaggcgcgtcgccgcatcgagcagctcaccgctgatgttgaa
gtcggtgtggtctacgagggtaaggtcgccaagctgatggattttggtgcctttgtcacc
atccttcctggtaaggatggactggtacacatctcacagatctccaatgagcgtgtcgag
aaggttagcgacaaactcaccgagggtgatgtgatcaaggttaaggtcctcgaggtcgac
aagcagggccgtatccgtctcagcatgaaggcagttgaagcctag
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