Candidatus Reidiella endopervernicosa: HUE57_12905
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Entry
HUE57_12905 CDS
T06650
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rev
Candidatus Reidiella endopervernicosa
Pathway
rev03030
DNA replication
rev03430
Mismatch repair
rev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUE57_12905 (dnaE)
03430 Mismatch repair
HUE57_12905 (dnaE)
03440 Homologous recombination
HUE57_12905 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rev03032
]
HUE57_12905 (dnaE)
03400 DNA repair and recombination proteins [BR:
rev03400
]
HUE57_12905 (dnaE)
Enzymes [BR:
rev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUE57_12905 (dnaE)
DNA replication proteins [BR:
rev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUE57_12905 (dnaE)
DNA repair and recombination proteins [BR:
rev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUE57_12905 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
OB_POT1A
Motif
Other DBs
NCBI-ProteinID:
QKQ27080
UniProt:
A0A6N0HXH5
LinkDB
All DBs
Position
complement(2332886..2336404)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTPPFVHLRTHTEYSLVDGIVRIKPLVKSVAAAGMAAVAVTDQSNLFAMVKFYRAALGAG
IKPIVGADVWIEGDEESGAPSRLVLLCKDSEGYLNLSELISRSYTEGQVRGIPILKRAWF
EGTTAGLIALSGGREGDVGQALIAGNQTQANELLMAWQRLFPDSYYLELQRTGRADEERY
LHAAVELAMQHRLPVVATNDVHFLKQNDFGAHEARVCIHDGRTLDDKRRPKRHSEQQYLR
SPEEMAELFSDIPEAIANSVEIARRCNLELNLGTPVLPDFPIPPGMTEAEFFREESRQGL
EQRLERIFDKASADFAELRKPYDERLEIELDVINSMGFPGYFLIVADFIRWAKENDVPVG
PGRGSGAGSLVAYALTITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
EHYGREKVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDRIAKMIPFEIGMTLEKALEEEE
FKRAYQDEDEVRALVDLARALEGCARNAGKHAGGVVIAPSKLTDFSPLYCEEGGGNLVSQ
FDKDDVEAVGLVKFDFLGLRTLTIIDWALKTINRKRVANGEEPVDISAIPLEDEKSFKLL
KACQTTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREP
VSYPDAKYQHESLKQILDPTYGVILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEEM
AKQRTVFAEGAEQNGVDSVLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTIWLKTYYPA
AFMAAVLSADMDNTDKVVTLIEECRSMELEVTPPNVNFSEHAFSVTDENVIVYGLGAIKG
VGEAAIEGIVAERLDNGLYQDLFDLCRRIDLRKANKRVMESLIRAGAFDCFEGVNRASLM
AQLPDALKAADQHANNESAGMADLFGGTNEDSAAPVTLVTLPEWDDEQRLQGEKETLGLY
LTGHPIERYEAEIEHFTSGRIEKFVGDEMTPPAGGQGGGGRQREKIVMLAGLVVGIRMMN
TRRGKMSFITLDDRTARIEVQLFDDDYQKYRNILNKDRVLVVEGGLSYDDYSGGFRMKAR
ELFDIEQARERHAKHLMIHLDSARMGEGVVDSIAAALRPFTEGRCKVCIDYLRSDARGPL
TLGDAWSVHPSDNLLHRLREVAGTESVTVEYG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactcccccctttgtccatctacgtacccatactgaatactcgcttgtcgacggtatc
gtgcgcatcaagccgttggttaaatccgtggcagccgcagggatggcggcagttgcggtc
accgatcagagcaatctatttgcaatggtcaagttctatcgtgcggctctgggtgctggt
atcaaaccaatcgttggtgctgatgtctggattgagggtgatgaagagagcggggcgccg
agtcgactagtgctgctgtgcaaggatagtgaggggtatcttaatctctcagagctgata
tcgcgcagctatacggaagggcaggtgcgtggtatcccgatcctgaaaagagcttggttc
gaagggacaaccgcaggactaatcgcactctccggtgggcgagagggagatgttgggcaa
gcactgatagccggtaatcaaacgcaagccaatgaactgctgatggcttggcaacgactc
tttcccgatagctactatctcgaactgcagcgaaccggaagggccgatgaggagcgctat
ctgcacgccgccgtagagctggcgatgcagcatcgtctgccagtggtggccaccaacgat
gtccactttcttaagcagaatgactttggagcacacgaggcacgcgtctgtattcacgat
ggacgtactctggatgacaaacgacgacccaaacgtcattcagaacagcagtatctgcgt
tcaccagaggagatggcggagcttttttccgatattcctgaggcgatagccaacagtgtt
gaaatagcccgacgctgtaatctcgaattgaatctgggtacgccggttctacccgacttc
ccgatcccccccggcatgactgaggcggagttcttccgagaagagtcacggcagggactt
gagcagcgtcttgagcgcattttcgataaagcgtctgcagacttcgcagagcttcgcaaa
ccctatgatgagcgccttgagatcgaactcgacgttatcaatagcatgggtttccccggt
tacttcctgatcgttgctgattttattcgatgggcgaaggagaacgatgtaccggtcgga
ccgggacgtggttcgggtgccggttcactggttgcctatgcactgacgattaccgatctt
gatccgcttgaatatgacctgctgttcgagcgattccttaatcccgaacgtgtctcgatg
cctgatttcgatgtcgacttctgcatggagggacgcgatcgggttatcgactatgtagcc
gaacactatggccgtgagaaggtctcgcagatcattacctacggttcgatggcggccaag
gcggtcgtgcgtgatgtaggtcgtgtgctcgggcacccctacggttttgtcgatcgcatc
gccaagatgattccgtttgagatcggtatgacgctggagaaggcgcttgaggaagaggag
ttcaagcgcgcctatcaggatgaggatgaggtgcgtgccctggtcgatctggcgcgagcg
ctagagggttgtgcaagaaacgccggcaaacatgctggtggtgttgtcatcgccccttcc
aagctgaccgatttctctccgctctactgtgaagagggcggcggtaatctggttagccag
ttcgacaaggatgatgtggaggcagtggggctggtcaagttcgactttctcggtctgcgt
accctgaccattatcgattgggcgctgaagacgattaatcgcaagcgcgtagcgaatggc
gaggagccggtcgatatcagcgcgattccacttgaggatgagaagagttttaaactcctt
aaggcgtgtcagaccacagccgttttccagctcgaatcacgtggtatgaaggatcttatc
aaacgtcttcaacccgactgttttgaagatattatcgcgctggtggcgctatttcgcccc
ggtccactgcagtcgggcatggttgataactttatcgatcgtaaacacggtcgtgaacct
gtctcctatcccgatgcgaaatatcagcacgaatcactaaagcaaattctcgatccaacc
tacggcgttattctctaccaggagcaggtcatgcagatcgctcaggtactggccgggtat
agcctcggcggtgccgacatgctgcgccgtgcgatgggtaagaaaaagcccgaagagatg
gccaagcagcgtaccgtgtttgccgagggtgcagagcaaaacggtgtcgattcagtgctg
gcgatgaagatcttcgacctggtagagaagttcgccggttacggtttcaataaatcgcac
tcggctgcctatgcattggtctcctaccagaccatctggctcaagacctactatcctgca
gcctttatggcggcggtgctatctgctgatatggataacacagataaggtagtaacgctg
attgaagagtgccgctccatggagctggaagtaacaccacccaacgttaatttttcagag
cacgccttctccgttaccgatgagaacgtcatcgtctatggtcttggcgctatcaagggg
gtaggtgaggcggctattgaggggatcgttgccgaacgtcttgataatggtctctatcag
gatctattcgatctctgccgtcgtatcgatctgcgtaaagcgaacaaacgcgtcatggag
tccctaattcgtgccggtgcctttgattgttttgaaggggtgaatcgtgcctcactgatg
gcgcagttgcctgatgcacttaaagcggccgatcagcacgctaataatgagagcgcaggc
atggcggatctattcggtggaaccaacgaggatagtgcagcccccgttacccttgtgaca
ctacctgagtgggatgatgagcagcggctacagggcgagaaagagaccttgggactctat
ctgactgggcacccgatagaacgttacgaggccgaaatagagcactttaccagtggacga
atcgagaagtttgtcggtgatgagatgacgccacccgctggtggtcagggcggcggtggt
cgacagcgtgagaaaattgtcatgctggcggggctggttgtcggtatccgaatgatgaac
acgcgccgaggcaagatgtctttcatcacacttgatgatcgaaccgccagaatcgaagtg
cagctctttgatgacgactaccagaagtatcgtaatatcctcaataaagaccgagtgctg
gtggttgaaggcggtcttagctatgacgactactccggtggttttcgcatgaaggcacga
gagctgttcgatattgaacaggcgcgtgagcgccacgcgaaacatctgatgattcacctc
gattcggcacgaatgggggagggggtggtcgattcgatcgctgctgcactgcgtcctttt
accgaagggcgctgtaaggtctgtatcgactacctgcgcagtgatgcccgtggtccactg
actctgggagatgcgtggagtgtccatccgagcgataatctactgcatcggctgcgtgag
gttgccggaaccgaatcggtgacggttgagtacggctga
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