Candidatus Reidiella endopervernicosa: HUE57_17860
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Entry
HUE57_17860 CDS
T06650
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rev
Candidatus Reidiella endopervernicosa
Pathway
rev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE57_17860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rev03019
]
HUE57_17860
03009 Ribosome biogenesis [BR:
rev03009
]
HUE57_17860
Enzymes [BR:
rev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUE57_17860
Messenger RNA biogenesis [BR:
rev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUE57_17860
Ribosome biogenesis [BR:
rev03009
]
Prokaryotic type
rRNA helicases
HUE57_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
DUF6702
Motif
Other DBs
NCBI-ProteinID:
QKQ27939
UniProt:
A0A6N0I040
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All DBs
Position
3294884..3296665
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AA seq
593 aa
AA seq
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MSEETISSFAQLALATPILKVIEEIGYETPSPIQAQSIPPLLDGNDLIGMAQTGTGKTAA
FALPLLSRIDLSNKTPQLLVLTPTRELAIQVAEAIQTYARHLKDFHILPVYGGQGMDIQL
RQLRRGVQVVVGTPGRVQDHLRRRTLVLDNLTGLVLDEADEMLRMGFIDDVEAILEHTPE
TRQIALFSATMPDQIRRIAKKYLKEPVEIKIKAKTATVSTITQRYWQVSGTHKLDALTRI
LEVEEFDAMIIFVRTKVATTELAEKLEARGYATSPLNGDMNQAMREKAVDRLKKGSLDII
VATDVAARGLDVQRISHVVNYDIPYDTEAYIHRIGRTGRAGRKGDAILFVAPRERRMLRS
IERATGQEITSMQLPSRDDIASRRVDQFKQTITDTLESQDLGFFEEVIEGYQSEHNIGLS
EIAAALSYLVQKERPLLPKLQDTKPAREERSDRGRDYKEREPRRSRERSPVRERELEEGM
IRYRIEVGHRHKVEPKNIVGAIANEAGIESQFIGQIAIHDDYSNVDLPDGMPKEIFKHLK
KVWVCGQQLRISAPSEQGSSEKPKGYKKPKADKDRGGHKPPKKQSGKGKKDRS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaccatcagctcctttgcgcagctcgctctcgccaccccgatacttaag
gttattgaggagatcggctacgagacaccttcccctattcaggcacaaagcatcccccca
ctacttgatggcaacgacctgataggcatggcacagaccggcaccggcaagaccgccgcc
tttgcactgccactgcttagccgtatcgacctatcgaacaagacaccgcagctactggta
ctgacacccactcgcgagctggccatacaggtcgccgaggctattcagacctacgctcgc
cacctgaaggatttccatatcctgccagtctatggtggccagggtatggatatccaactg
cgccagctacggcgtggcgtacaggttgttgtcggtacacccggacgcgttcaggatcac
cttcgtcgccgcaccctggtactcgacaatctcaccggtcttgttcttgacgaggctgat
gagatgttgcgcatgggctttattgatgatgtcgaggcgattcttgagcacacacccgaa
acacgtcagatcgccctcttctctgccaccatgccggatcagattcgacgcatcgccaag
aagtatcttaaagagccggtcgagatcaagatcaaggcgaagaccgctaccgtatcaacg
atcacacaacgctactggcaggtgagtggcacccacaaactcgacgcactgacacgcata
ctggaggtggaagagttcgatgcgatgatcatcttcgttcgcaccaaggtcgccaccact
gagctagcggagaaacttgaggcacgcggctacgccacctcaccgctcaacggcgatatg
aatcaggcgatgagagagaaggccgttgatcgccttaaaaagggctctctcgatatcatc
gtcgccaccgatgttgctgcacgtggtctcgatgtacagcgcataagccatgtcgttaac
tacgacatcccctacgacaccgaggcctacatccatcgtattggacgtaccggacgtgca
ggccgaaagggcgatgccattctcttcgttgcaccgcgagagcgacgcatgctgcgctcc
atcgaacgcgctaccggacaagagatcacctcgatgcaacttcccagccgggacgacatt
gccagtcgtcgcgtcgatcagttcaaacagaccatcaccgacaccctcgaatctcaggat
cttggtttctttgaagaggtcattgaggggtatcagagcgaacataatatcggcctgagt
gagatcgcagctgcgctcagctacctggttcagaaagaacgtccgttactacccaaactt
caagataccaagcccgcgagagaagaacgaagcgaccgtggccgtgattacaaagaacgc
gagcccagacgcagccgtgaacgttcacctgtgcgcgaacgtgaactcgaagaggggatg
attcgctaccgcatcgaagtgggtcacaggcacaaggttgagcctaagaatatcgtcggt
gccatcgctaatgaggcgggtattgaaagccagtttatcggtcaaatcgccattcacgac
gattacagcaatgtcgatcttcctgacgggatgcccaaagagatcttcaaacacctgaag
aaggtttgggtctgtggccagcagctacgcatcagcgcgccaagcgaacagggttcaagc
gaaaaaccgaaaggctataaaaaaccaaaagccgacaaggatagaggcggccacaagcca
cctaagaaacagagcgggaaagggaaaaaggatcgcagctaa
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