Candidatus Reidiella endopervernicosa: HUE57_18700
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Entry
HUE57_18700 CDS
T06650
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
rev
Candidatus Reidiella endopervernicosa
Brite
KEGG Orthology (KO) [BR:
rev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rev03019
]
HUE57_18700
Enzymes [BR:
rev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HUE57_18700
Messenger RNA biogenesis [BR:
rev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HUE57_18700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
QKQ28089
UniProt:
A0A6N0I0G9
LinkDB
All DBs
Position
complement(3445859..3446899)
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AA seq
346 aa
AA seq
DB search
MVGLLLANAYPDRVAQRRGANGNRYLLANGRGAKLLDSCRGAELMVAVSLDGRGDESRIF
LAASIAVADLEQSFPAQIAWQAETYWSRSEGVVVSREARRYGALLLGERPLKVDDEAAVV
AAMLDGVRAEGLEALPWSDAARQLRTRLRSLRQWLPDEAWPDLSDSHLLETVEVWLAPYL
NNISRRSHLARLDMVAIIKSMLDWSQQQQLEELAPTHLQVPSGSRKRLEYQVDGSAPVLA
VKLQELFGLAETPAVARGRVEVMLHLLSPAQRPIQVTQDLKSFWANTYAEVKRELKGRYP
KHPGPTTRGTLHRRRGPNHGVEVSSVRTKADQTGSTVRVSLYGRFS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcttgctgctggccaacgcctatcccgatcgagtcgcacagcggcgcggtgca
aatggtaatcgctatctgctcgccaatgggcgtggtgcaaagctgttggatagttgtcgt
ggtgccgaactgatggtggcggtgagtctcgatggtcgaggcgatgagagtcgtatcttc
cttgcggcatccatagccgttgcggatctggagcagagcttcccagcgcagatcgcctgg
caggccgagacctactggtcacgcagtgagggagtagtcgtctcgcgagaggcgaggcgc
tacggggcattactgttgggggagcgaccactcaaggtggacgatgaggcggcggtcgtg
gcagcgatgcttgatggtgtacgtgctgaggggcttgaggcgctaccgtggagtgatgca
gcgcgtcagttacgcacgcggttacgctcgttacgtcagtggctgcccgatgaggcgtgg
cccgatctttccgatagccatctgcttgaaacggttgaagtgtggttggcaccctatcta
aataacatcagtcgtcgtagtcacctcgctcgtctcgatatggtggcgattatcaaatcg
atgctcgactggtcgcagcaacagcagctcgaagagctggcaccgacccacctgcaggtg
ccgagcggttcgcgtaagcggctcgagtatcaggtcgatgggtctgcgccggtattggcg
gtgaagctgcaggagttgtttggcctggctgagacgcctgctgttgcgcgaggacgtgtc
gaggtgatgctgcatctgctctcgcccgcgcagcggcctattcaggtgactcaggatctg
aagagtttctgggccaacacctatgccgaggtgaaacgtgaattaaagggtcgctacccc
aaacaccctggcccgacgacccgtggaacgctccaccgacggcgcgggccaaaccacgga
gtcgaggttagttcggtgcgaactaaagcagatcaaacagggtccacagttagggtgagc
ctttacgggagattctcttga
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