Rickettsia endosymbiont of Cimex lectularius: LF884_00960
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Entry
LF884_00960 CDS
T10696
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rex Rickettsia endosymbiont of Cimex lectularius
Brite
KEGG Orthology (KO) [BR:
rex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LF884_00960 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rex03019
]
LF884_00960 (rnc)
03009 Ribosome biogenesis [BR:
rex03009
]
LF884_00960 (rnc)
03036 Chromosome and associated proteins [BR:
rex03036
]
LF884_00960 (rnc)
Enzymes [BR:
rex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LF884_00960 (rnc)
Messenger RNA biogenesis [BR:
rex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LF884_00960 (rnc)
Ribosome biogenesis [BR:
rex03009
]
Eukaryotic type
90S particles
RNase
LF884_00960 (rnc)
Prokaryotic type
rRNA processing factors
LF884_00960 (rnc)
Chromosome and associated proteins [BR:
rex03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LF884_00960 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
UCM92889
LinkDB
All DBs
Position
complement(210860..211570)
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AA seq
236 aa
AA seq
DB search
MITSKESALSAPENLEQDIGYNFNNKDILLEALSHPSLKQHTLKHGIQKNYERLELLGDA
IINFIITEILFKNFSTYDEGKLAKIRAYLVCKESLCKVAAKINLSDYIIMTHGEAVLGGR
QNPNNIENTMEALIAAIYLDSNIDTTQKIVYDLWYEFISITDLTDYDPKTTLQELAQSKG
IERPVYEVIKREGSPHASIFTVLVKMEAYQQTGTGHSVKEAEKVAARKLMNYLNKL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaagaatcagctctttctgctccggaaaatcttgaacaagatatagga
tataattttaataataaagatattttacttgaagcgttaagtcatccttcccttaagcaa
cataccctaaagcatggaattcaaaaaaactatgaacgtttagaattacttggtgatgca
ataattaattttatcattactgaaattttatttaaaaatttctctacttatgatgagggg
aaattagcaaaaattagagcatatctagtctgtaaagaatcactttgcaaagtagctgca
aaaatcaatttgtcagactatattattatgacccatggcgaagcagtattagggggaaga
caaaaccctaataatattgagaatactatggaagcattaattgctgccatttatcttgat
agtaatattgatacgacccaaaaaatagtatatgatttgtggtatgagtttatatctatt
actgatttaactgattatgaccctaaaactactcttcaggaattagcacaaagcaaggga
attgaaagacccgtgtatgaagtgataaaaagagaaggatctccacacgcatctatcttc
actgtattagtaaaaatggaagcctaccaacaaactggtactggtcattcagttaaagaa
gcagaaaaagttgcggctcgtaaattaatgaactacctcaacaagttgtaa
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