Rickettsia endosymbiont of Cimex lectularius: LF884_03615
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Entry
LF884_03615 CDS
T10696
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rex Rickettsia endosymbiont of Cimex lectularius
Pathway
rex03420
Nucleotide excision repair
rex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF884_03615
03430 Mismatch repair
LF884_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rex03400
]
LF884_03615
Enzymes [BR:
rex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF884_03615
DNA repair and recombination proteins [BR:
rex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF884_03615
MMR (mismatch excision repair)
Other MMR factors
LF884_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DEAD
ResIII
GpA_ATPase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
UCM93339
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Position
complement(772096..774069)
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AA seq
657 aa
AA seq
DB search
MTQQSFLNSLNPQQLLAVSHVHGPILVLAGAGTGKTKVLTTRIANIIQQGLTLPQNILAV
TFTNKAAREMQDRINKMIDCYGLNIGTFHSIAARILRQQAEHLNFSLNSRFTIISPDDQL
KLVKDIVKQKNIDTKKYVPKLLHIIISCWKDQGLLPYKLSESDIKLPIHKVAQFVYDEYQ
QNLLASNVVDFGDLLLYNNELFIKNPIILKYYQEQYKYILIDEYQDTNAVQYLWARMLAS
SSKNICCVGDDDQSIYSWRGAEVGNILRFEKDFPNATIIKLEQNYRSSSKILLAASSVID
HNKNRHGKTLWTDKNDGEKIKIISCWNDKEEARFVVSEISKLVTEGKYNAGLVAILVRAG
FQTRAFEEVFISNALPYKIIGGLKFYERMEIRDLLAYIRITLNHSDNLALERIINVPRRA
IGNTTLKQIKDYAVEHNIPIIAAIRQMLQAETFKNKVKDSLNKFISNIDNWSFRYKNDPA
VNVTKSLLEESGYLEMLQEEKTDEATGRIENINEMLRAIAEFDNIQDFIEHSSLVMENEE
LESNFGGSVSIMTLHAAKGLEFDLVFLPGWEEGVFPHQRSLKEGEKGLEEERRIAYVGIT
RAKKDLYITYAESRFMFYEIIRSSPSRFLGEIPDNVCVRTSSTKQLNYLGTKHKVSF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaaagtttcctaaactcattaaatcctcaacaactgctagcagtgtcccat
gtacatggtcctattcttgtgcttgctggagcagggactggtaaaactaaagtgttaacg
actagaatagccaacataatccagcaagggttaactctacctcaaaatattctagcagtt
acttttactaataaagctgctagagaaatgcaagatcgaatcaacaaaatgattgattgt
tatgggctaaatataggtacatttcattctatagcagcaagaattttgcgtcagcaagca
gaacatttgaattttagcttgaatagtaggtttactattattagccctgatgatcagctt
aaattggttaaagatatagttaagcagaaaaatatagataccaaaaaatatgttcccaaa
cttttacatattattatttcgtgttggaaagatcaggggttattgccgtataaactttct
gaatctgatattaagctaccaattcataaagtggctcaatttgtctatgacgaatatcag
caaaatttactagcatctaatgtagtagattttggggatttactactttacaataatgaa
ttgtttataaaaaaccctataatattaaagtattatcaggaacaatataaatatattctg
attgatgagtatcaagatactaacgctgttcagtatctttgggcgaggatgttggcaagt
agctcaaaaaatatctgctgtgttggtgatgatgatcaatctatatatagttggcggggt
gcagaagttggtaatatattacgttttgaaaaggattttccaaatgctacaataataaaa
ttagaacaaaattatagatctagctcaaaaatcttattagctgcatcaagtgtaattgac
cataataagaatcgtcacggtaaaacattatggactgataaaaatgatggagaaaaaatt
aaaattatatcttgttggaatgataaagaagaagcaagattcgttgtatctgaaattagc
aagttagttacagagggaaagtataatgcaggattagttgcgatattagttagagcaggt
tttcaaactagagcatttgaagaagtgtttattagtaatgcattaccatacaaaattatt
ggtggtcttaagttttatgaacgaatggagatacgtgacttacttgcctatatacgtatc
actttaaatcatagtgacaatcttgctcttgaacgcataataaatgttccaaggagagct
attggtaataccacattaaaacaaataaaagattatgcggttgaacataatatacctatt
attgctgccattcgtcagatgttacaagcagaaacttttaaaaataaagtcaaagatagt
ctaaacaaatttattagtaatatcgataattggagttttcgatataaaaatgacccggct
gttaatgtcactaaatctttactagaagaatcaggttatcttgagatgctacaagaagaa
aaaacagatgaagcaactggcagaattgaaaatattaacgaaatgcttagagcaatcgca
gaatttgataatattcaagattttatagaacattctagtttggtaatggaaaatgaggaa
ttagaatcaaattttggtggttctgttagcattatgacgctccatgctgctaaaggtctt
gaatttgatctagtttttctaccaggttgggaagagggggtgtttccacatcagcgatca
ctaaaagagggtgagaaaggtctagaagaagagaggagaatcgcctatgtgggtattact
agagctaagaaagacctatatattacttatgcagaaagtcgttttatgttttatgaaata
ataagatcctctccttctaggtttcttggagaaataccagataatgtttgtgttagaact
tcttcaactaaacaacttaattatttaggtacaaaacacaaagtttctttttaa
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