Rickettsia endosymbiont of Cimex lectularius: LF884_05980
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Entry
LF884_05980 CDS
T10696
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rex Rickettsia endosymbiont of Cimex lectularius
Pathway
rex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF884_05980 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rex03400
]
LF884_05980 (xth)
Enzymes [BR:
rex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LF884_05980 (xth)
DNA repair and recombination proteins [BR:
rex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LF884_05980 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DEXH1_3_5_N
PPP5
Motif
Other DBs
NCBI-ProteinID:
UCM92391
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All DBs
Position
complement(1233950..1234729)
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AA seq
259 aa
AA seq
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MKIATWNINSIRIRLQHLRDFLTEVDPDIVLLQEIKCETDKFPFDELSDLAYNFYVYGQK
SYNGVAILSKFPADEVVKDFPGINCTNQARIIEISLQTPIGFCSITSLYAPNGSLVGSDK
FKMKLEFYDNLINYFESKRSLDTKVIVGGDFNIAPFDIDVYSAKELQNITCFTSEEKQRL
RIILNSSFEDLYRLSNPTKQEFSWWDYRAGCFEQNKGMRIDMILASSNVADYLNDCYMHY
SLRTKIKPSDHIPVVAIIS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaattctataagaataagactacaacatttacgggac
tttttaacagaagtagatccagacattgttttgttacaagaaatcaagtgtgagactgat
aagtttccttttgatgaactatcagatctagcgtataatttctatgtgtatggtcagaaa
tcctataatggtgtggctatcttatcaaagtttccagctgatgaagtggtaaaagacttt
ccgggtattaattgtactaatcaagcacggattatagaaatatctctacaaactcctata
ggtttttgtagtatcacttcattatatgcacctaacggttcattggtaggtagtgataaa
tttaaaatgaaattagaattttatgacaatttaattaattacttcgaatccaagagatct
cttgatactaaggtgatagttggaggagattttaatattgctccttttgatattgacgta
tactccgcaaaagagttacaaaatattacttgttttactagtgaagaaaaacaacgactg
agaattattttaaattctagttttgaggatttatatagattatcaaatcctactaagcaa
gaattctcttggtgggattatagagcaggttgcttcgaacaaaataaaggtatgcgtatt
gatatgatacttgcatcaagcaatgttgcagattatctaaatgattgttacatgcattat
agtttacgaacaaaaattaagccttctgatcatatacccgttgttgctatcattagttaa
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