Rickettsia endosymbiont of Cimex lectularius: LF884_07320
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Entry
LF884_07320 CDS
T10696
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rex Rickettsia endosymbiont of Cimex lectularius
Pathway
rex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF884_07320 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rex03400
]
LF884_07320 (uvrB)
DNA repair and recombination proteins [BR:
rex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF884_07320 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LF884_07320 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
P-loop_SecA
Kinesin
UB2H
AAA_30
AAA_22
HEM4
Microtub_bd
DUF87
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UCM93479
LinkDB
All DBs
Position
1495752..1497740
Genome browser
AA seq
662 aa
AA seq
DB search
MNKFSIVSKYSPAGDQPRAINEIVKGLESRMRSQILFGITGSGKTFTMANIIERTGRPSL
IMVHNKTLAAQIYSEMKAIFPNNAVEYFVSYYDYFQPEAYIARTDTYIEKDSSINEQIDL
LRHSATRSLLERRDVIVVSSVSCIYGLGSPNLYYQMTISLKSGEIYARDKLLNDLVNLQY
ERNDLGFERGTFRVKGDNIDIFPVHYNDKAWRLSFFGNELEYISEFDPLTGEKLAKLDQA
VIYAKSHFVTPKEVVQNAISQIEEELQRRLEFLKAHDKLVEAQRLNQRTQYDMEMMMETG
SCKGIENYSRFLTSKANGQPPPTLFEYLPKDALLFVDESHVSVPQIRAMYNGDRARKEVL
VEHGFRLPSALDNRPLKFEEWQDFRPQTVFVSATPGPFELEETAGIMVEQIIRPTGLLDP
ECIIKPATNQVEDLISEIQYTINKGFRVLVTTLTKKMSEDLTNYLQELGYKVSYLHSNVH
TLERMEIIRDLRQGTIDIIVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSQGRVILYADRNTKSIDKAVSETYRRRKIQEEYNEQHGIIPQTINHHIHALIELDK
LDSKLDNKKQTHILLDNPVKLKAHIDRLKKEMYEKASNLEFEQAAKIRDQINVLEEAALE
LT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ataaataaattttcaatagtatctaaatatagtccagctggcgatcagccaagagcaatt
aatgaaatcgttaaaggtcttgaatctagaatgcgttcacaaatactctttggtattact
ggttctggtaaaaccttcactatggcaaatattattgagagaaccggtagaccatcactt
attatggtacataataaaacattagctgcccaaatttattcagaaatgaaggcaattttt
cccaataatgccgttgaatattttgtatcatattatgattatttccaacctgaagcatat
attgcaagaaccgatacttatatagaaaaagattcttcgataaatgaacaaatagattta
ttaagacactctgccactaggtcactgctggaacgtcgggatgtaattgttgtatcctca
gtttcttgtatttatggtcttggttcaccaaatctttattatcagatgacaataagcctt
aagtctggggaaatttatgctagagataaattgcttaatgacttagtaaatttacaatat
gagcgtaatgatttggggtttgaacgcggtacgtttagggtaaaaggtgataatattgac
atatttccagtacattataacgataaagcttggcgattgtcattttttggcaatgaactt
gaatatataagcgaatttgatccgcttacaggtgaaaaattagctaaattggatcaagct
gtgatttatgctaagtcccactttgtaacacctaaagaagtagtacaaaatgctatatcg
caaattgaggaagaattacaacgacgcttagaatttcttaaagcacatgataaattagta
gaggctcaaagattaaatcagcgtacccaatatgatatggaaatgatgatggaaactggc
agctgtaaaggcattgagaattactctcgattcctaactagtaaagcaaatgggcagcct
ccgccaaccttatttgaatatttgcccaaagatgctttactatttgtcgatgaaagtcac
gtatctgtcccgcaaattagagcaatgtataatggcgatagggcaaggaaagaagtatta
gtagaacacgggtttcgccttccatcagccttagataacagaccattaaaatttgaagaa
tggcaagattttagacctcagacggtttttgtctcggcaacacctgggccttttgaattg
gaagaaacagcagggattatggtcgaacaaattatcagaccaacgggactactagaccca
gaatgtattataaaaccagcgactaaccaagttgaagatttgataagcgagattcaatat
acgataaataaaggattccgcgttttagtgacaacattaactaaaaaaatgtcagaagat
ttaacaaattatctacaagaattagggtataaagtatcatatttgcactctaatgttcat
actcttgaacgtatggaaatcataagagatttacgccaaggtactatagatattattgtt
ggtattaatttattgcgggaaggtttagatattccagaatgtggacttgttgcaatactc
gatgctgataaagaaggttttttgcgttctgaagtctcattaattcaaactatcggcagg
gctgcaaggaatagtcaaggaagggtaatactctatgcagatcgcaacaccaagtctatt
gataaggcagtaagtgagacatataggagaaggaaaattcaggaggaatataatgagcaa
catggcataataccgcagacaattaatcaccatatccatgcactaattgaattagacaaa
ttggatagtaagttagataataaaaaacaaactcatatattattagacaatccagtgaaa
ttgaaagctcatatcgatagattaaagaaggaaatgtatgaaaaggctagtaatttagaa
tttgaacaggcggcaaaaatacgagatcaaattaatgtactagaagaagcagccttagag
ctaacttaa
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