Rhodococcus erythropolis CCM2595: O5Y_05945
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Entry
O5Y_05945 CDS
T02806
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rey
Rhodococcus erythropolis CCM2595
Brite
KEGG Orthology (KO) [BR:
rey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rey03021
]
O5Y_05945
Transcription machinery [BR:
rey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O5Y_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
MarR
HTH_Crp_2
HTH_24
MarR_2
DUF7343
HTH_23
Vac_Fusion
KORA
HTH_31
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AGT91060
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Position
complement(1293416..1294234)
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AA seq
272 aa
AA seq
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MTAVPPDDTVPPGKAVPPDKKDQYELAVELFVSMASLPPDDPTREKITNSIIELCLPLAT
HVARRYQGRGQPFEDLEQVARVGLVQAVQRFDVDKGSDFLSFAVPTVMGEVRKHFRDHGW
SVRVPRSLQERHLALNRALTSLSQTLGRAPTVAELATELDIEPDEVEQGLTAGNSYRTTP
LDTASAGDGSGLTLIDTLGQYDEAISRIDNHETLRPALLALPERERTIVVLRFFGHLTQS
QIAEKIGISQMHVSRILTQTLKQLRTEMGEIF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctgtcccaccggacgatactgtcccaccgggcaaggctgtaccaccggacaag
aaggaccagtacgaactagctgtcgaattgttcgtctcgatggcgtcgcttccgccggat
gatccgacccgagaaaagatcaccaactcgatcatcgaactgtgcctaccgctcgccacc
cacgttgcacgtcgctaccaggggcgcggccagcctttcgaggacttggaacaagttgcg
cgcgtggggttggtacaggctgtgcagcgattcgacgtagacaaaggatcggatttcctg
tcgttcgcagtccccaccgtaatgggcgaggtacgcaagcattttcgcgatcacggctgg
tccgtacgcgtacctcgcagccttcaggaacgacatcttgccctcaaccgggcgctcacg
tcgttgtcgcagacgctcggccgtgcaccgacggtagcggaacttgccacggagctcgac
atcgagccggacgaggtcgaacaggggttgaccgccggaaattcgtatcgaaccacaccg
ctcgacaccgcgtcagccggcgacgggagcggactgactctgatcgatactttgggacag
tacgacgaagcgatcagtcggatcgacaatcacgaaaccctgcgacccgcgctccttgca
ctaccggagcgcgagcgcacgatcgtggttctcagattcttcggtcatctcacccagtcc
cagattgccgaaaagatcggcatctctcagatgcatgtatccagaatcctcactcagaca
ctgaagcagctgcgcaccgagatgggtgaaatcttctga
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