Rhodococcus erythropolis CCM2595: O5Y_12710
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Entry
O5Y_12710 CDS
T02806
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rey
Rhodococcus erythropolis CCM2595
Pathway
rey00300
Lysine biosynthesis
rey00470
D-Amino acid metabolism
rey01100
Metabolic pathways
rey01110
Biosynthesis of secondary metabolites
rey01120
Microbial metabolism in diverse environments
rey01230
Biosynthesis of amino acids
Module
rey_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O5Y_12710 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O5Y_12710 (dapF)
Enzymes [BR:
rey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O5Y_12710 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
AGT92403
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Position
2729239..2730108
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AA seq
289 aa
AA seq
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MDFSKGHGTQNDFVVLPDLDVRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL
GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV
VVHGYDATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEVLSA
LDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAALKF
DGRDEGSVLVRVLGGEVQVTVEGGEGSLRGPSVLVANGTISDAWWQSLM
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtaagggccacggcacgcagaacgacttcgttgttctccctgacctcgac
gttcgggtcgatctcgagccggcgcgagtttcagcgttgtgtgatcgtcagcgtggcctc
ggcgccgacggcatccttcgtgtcgcccgggcaggcgcacttgcggacgcgggcgtgctc
ggtgcgctgcccgacggcgtcgctgccgaagactggttcatggactaccgcaacagcgac
ggctccatcgcggagatgtgcggaaacggagttcgcgtattcgcccactatctcaaggcc
tcgggcttggagagcaaggacgagttcgtggtcggcagtcgtgccggagcgcgtccggtc
gtggtgcacggctacgacgccacacatggtgacgtgaccgtggcgatgggcccgatcaag
gacctcggcaccagttcggcaacaatcgacggccgcgtcttcgccggcgtcggcatcgac
gtcggtaatccgcatttggcgtgtgtcgacgagcacgtgacggcagaagttttgagtgcg
ctcgatttgagtgtttctccgggcttcgatccggggttcttcccgcacggggtcaacatc
gagatcgtgacgccgatccacgacggtggggttcacatgcgcgtacacgagcgtggcgtg
ggcgagactcgttcctgcggaaccggaacggtcgcagctgcggccgcggcgctgaagttc
gacggccgcgacgaaggctcggtgctggtgcgcgtgctcggcggcgaagtgcaggtcacc
gtcgaaggcggcgaagggtcgttgcgggggccctcggttctggtggcgaacgggacgatc
agcgatgcctggtggcaatcgctcatgtga
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