Rhodococcus erythropolis CCM2595: O5Y_17870
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Entry
O5Y_17870 CDS
T02806
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rey
Rhodococcus erythropolis CCM2595
Pathway
rey03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rey00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
O5Y_17870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rey03019
]
O5Y_17870
03009 Ribosome biogenesis [BR:
rey03009
]
O5Y_17870
Messenger RNA biogenesis [BR:
rey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O5Y_17870
Ribosome biogenesis [BR:
rey03009
]
Eukaryotic type
Pre-60S particles
RNases
O5Y_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF362
Motif
Other DBs
NCBI-ProteinID:
AGT93414
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All DBs
Position
3925254..3925862
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AA seq
202 aa
AA seq
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MFLVQDKLVWIDCEMTGLRLESDKLIEIAALVTDSDLNILGEGVDIVIHADDDALAAMPD
VVKKMHAKSGLTEEVRKSTVTLAEAEKEVLAYIRKHVPVAGTAPLAGNSIATDRGFISRD
MTALDTYLHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRGTA
FVAAPGPSSAEIAAVVEGLGPA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctggtgcaggacaaattggtatggatcgattgtgaaatgaccgggctgcgactc
gagtcggacaaactcatcgagattgcggctctggtgaccgacagcgacttgaacatcttg
ggcgaaggtgtggacatcgtcatccacgccgacgacgacgcattggctgcaatgcccgac
gtcgtgaagaagatgcacgcgaagtcgggactgaccgaagaggttcgtaagtcgacggtc
accctcgccgaggcggagaaagaggtgctcgcgtacatccgcaagcacgttcccgtcgcc
ggtacggctcccctggcaggtaattccatcgccaccgaccgcggattcatctcacgtgac
atgacggcgctggacacatacctgcactaccggatgatcgacgtcagctccatcaaagaa
ctctcccgccgctggtacccgcgaatctacttcggccagcccgaaaaaggcctcgcccac
cgggcactcgccgacatcaaggaatccatccgcgaactcaagtactaccgcggcaccgca
ttcgtcgcggcgcccggaccgtcgagcgcggagatcgcagccgtcgtagagggcttgggt
cccgcctga
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