Rhodococcus erythropolis CCM2595: O5Y_19110
Help
Entry
O5Y_19110 CDS
T02806
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rey
Rhodococcus erythropolis CCM2595
Pathway
rey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5Y_19110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rey03019
]
O5Y_19110
03009 Ribosome biogenesis [BR:
rey03009
]
O5Y_19110
Enzymes [BR:
rey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O5Y_19110
Messenger RNA biogenesis [BR:
rey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O5Y_19110
Ribosome biogenesis [BR:
rey03009
]
Prokaryotic type
rRNA helicases
O5Y_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
HEM4
Motif
Other DBs
NCBI-ProteinID:
AGT93650
LinkDB
All DBs
Position
complement(4232243..4234018)
Genome browser
AA seq
591 aa
AA seq
DB search
MSDIERDPEPPTFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLEGKDVVGLAQTGTG
KTAAFAVPVLSRIDTSIKQTQALVLAPTRELALQVAEAFGKYSAHIPGLNVLPIYGGQSY
GVQLSGLRRGAHVVVGTPGRVIDHLEKGTLDLTNLKYLVLDEADEMLKMGFQEDVERILR
DTPGDKQVALFSATMPGSIRRISKQYLNNPVEITVKSKTSTASNITQRYIQVAHQRKLDA
LTRVLEVEAFEAMIIFVRTKQATEDLAEKLRARGHSAAAINGDIVQAQRERTIGQLKNGA
LDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRQGDALLFVAPRERH
LLKSIEKATRQPLAEMQLPSVDDVNAQRVAKFGDSITESLASENLAMFRKMIEDYDQEHD
VPLIDIAAALALQSRDGEAFLLSPEPPAPPRREREPREPRPPRRFDDGPAPRSRGPEGQE
LAAYRIAVGKRHRVVPGAIVGAIANEGGLRRSDFGHISIRPDHSIVELPADLSNETLEAL
RRTRISGVLIQLQPDFGPPQGRPSGRGDRGGRDDRGGRDDRRGGGRDRYND
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgagcgtgaccccgaacccccaacatttgccgacctcgacatcgatgat
cgggtactgaaggcactgtcagacgtgggctacgagtcgccctcgcccattcaggctgcc
accattccgccgctgctcgaaggcaaggacgtcgtcggtctcgcacagaccggtaccggc
aagaccgcagccttcgcagttccagtcctgtcgcggatcgacacgtcgatcaagcagacc
caggcgctggtgcttgctcccacgcgtgagctggcgcttcaggttgccgaggcattcggc
aagtactccgcgcacatccccggactcaacgtgctgccgatctacggtggccagagctac
ggcgtccagctgtcgggcctgcgccgcggcgcacacgtcgtcgtcggtaccccgggtcgt
gtcatcgaccatctcgaaaagggcaccctggatctgaccaatctcaagtacctcgttctc
gacgaggccgacgagatgctcaagatggggttccaggaggacgtcgagcgcatcctccgc
gacacccccggcgacaagcaggtcgccctgttctccgcaacgatgcccggctcgattcgc
cggatctcgaagcagtacctgaacaatccggtcgagatcaccgtcaagtccaagacgtcg
accgcctcgaacatcacgcagcgctacattcaggttgctcatcagcgcaagctcgatgca
ctgacccgagtcctcgaggtcgaggcattcgaggcgatgatcatcttcgtccgtaccaag
caggccaccgaagacctggcggagaagctgcgggcccgcgggcactcggctgccgcgatc
aacggcgacatcgtccaggcacagcgtgagcggaccatcggtcagctcaagaacggcgcc
ctcgacattcttgtcgcgaccgacgttgccgctcgaggcctcgacgtcgatcgaatctcc
cacgtcgtcaactacgacatcccgcatgacacggagtcgtacgttcaccgcatcggtcgt
accggccgcgccggtcgtcagggtgacgcgttgctgttcgtcgctccgcgtgagcgtcat
ctgctcaagtccatcgagaaggcgacgcgtcagccgcttgcggagatgcagcttcccagt
gtcgacgacgtcaacgcccagcgcgtggccaagttcggtgactccatcacggagagcctg
gcctcggagaatctcgcgatgttccgcaagatgatcgaggactacgaccaggaacacgat
gttccgctcatcgacatcgctgccgctctggcattgcagtcgcgcgacggcgaagcattc
ttgctttctcccgagccgccggcaccgccgcgccgtgagcgcgagccgcgtgaaccgcgt
ccccctcgtcgtttcgacgacggcccggctcctcgctcgcgtggacccgagggccaggag
ttggctgcataccgcattgcagtcggcaagcgtcaccgcgtcgttccgggtgccatcgtc
ggtgccatcgccaacgagggtggacttcgtcgaagcgacttcgggcacatcagcattcgc
ccggatcacagcatcgtcgagctgccggccgacctctccaacgagactctcgaagctttg
cgtcgcacacgcatctccggcgtcctgatccagctgcagcctgatttcggcccgccgcag
ggacgtccgagtggccgtggcgaccgtggtggccgggacgatcgcggtggacgtgacgac
cgccgcggtggcggacgcgatcgctacaacgactga
DBGET
integrated database retrieval system
