Rhodococcus erythropolis CCM2595: O5Y_21935
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Entry
O5Y_21935 CDS
T02806
Name
(GenBank) ATP-dependent DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rey
Rhodococcus erythropolis CCM2595
Pathway
rey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rey00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O5Y_21935
09124 Replication and repair
03420 Nucleotide excision repair
O5Y_21935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rey03021
]
O5Y_21935
03400 DNA repair and recombination proteins [BR:
rey03400
]
O5Y_21935
Enzymes [BR:
rey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O5Y_21935
Transcription machinery [BR:
rey03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
O5Y_21935
DNA repair and recombination proteins [BR:
rey03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
O5Y_21935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AGT94209
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All DBs
Position
4813643..4815301
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AA seq
552 aa
AA seq
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MTDGPLIVQSDKTLLLEVDHERAGDARQAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLILVSLDRAVLTEVM
RHKKISPMLGEKVDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHPIDLAFEEG
HWELRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK
RELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTMTDAERMSYAVAEPEERYKLCSTAHTKIAVVKSILAKHPDSPTLVIGAY
LDQLDELGEALNAPVIKGSTKNKEREILFDQFRNGEIQTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPAIG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggaccgttgatcgtccaatccgacaagacgctgctgttggaggtcgaccac
gagcgcgccggcgatgccaggcaggcaatcgcccccttcgcggaactcgaacgcgccccc
gagcacgtccacacgtatcgcatcactcccctggccttgtggaatgcccgcgccgccgga
cacgacgccgagcaggttgtcgacgctctggtttcgttctcacgattcgcagttccgcaa
ccgctgctggtcgacatcgtcgacacgatggccaggtacggacgcttgcagctggtcaag
agcccggtgcacggcctcatcctggtcagcctcgaccgggcagtcctcaccgaggtgatg
cgacacaagaagatctcaccgatgctcggtgagaaggtcgacgacgacaccgtgattgtc
cacccgagcgaacgcggccgcctcaagcagatgttgctcaaggtgggctggccggccgag
gacctcgccggctatgtggacggcgaagcgcacccgatcgatctcgctttcgaagagggc
cactgggaactgcgcgactaccagcagatggcagcggattcgttctgggccggcggctcg
ggcgtcgtcgtgctgccgtgtggcgccggcaagacgatggtgggcgcagcagccatggca
aaggccaaagccaccacactcatcctcgtcaccaataccgtcgccggtcgtcagtggaag
cgtgagctcatcgcccgcacgtcgttgaccgaggaagaaatcggcgagtactccggcgag
cgcaaggagattcggccggtcacgatcgccacttaccaggtgatcacgcgtcgtacgaag
ggcgagtacaagcacctcgaacttttcgactcccgcgactggggactggtgatctacgac
gaggtccacttgctgcccgcacccgtcttccggatgacggcagacctgcaatcgcgccgc
cgtctcggcctgaccgcaacgctggttcgtgaggacggccgcgaaggcgacgtcttctcg
ctcatcggccccaagcgctacgacgctccgtggaaggacatcgaagcgcagggctggatc
gcgccggcagactgcgtcgaggtgcgagtgacgatgacggacgccgagcgcatgtcctat
gccgtcgccgaaccggaggagcgctacaaactgtgctcgacggcgcacaccaaaattgct
gtcgtgaagtcgattctggcgaagcacccggattcaccgaccttggtgatcggtgcgtat
ctcgatcagctcgacgaactcggcgaagccctgaacgccccggtgatcaagggatccacc
aagaacaaggaacgtgagatcctgttcgatcagttccgcaacggtgagatccagacgctg
gtggtgagtaaggtcgcgaacttctcgatcgaccttccggaggcgtctgtcgccgtgcag
gtttcgggaaccttcggatcgaggcaggaagaagctcagcgactcgggcgactgttgcgc
cccaagcacgacggcggtcaggcccacttctattcggtggtttcccgcgacactctcgat
gcggaatatgcggcacatcgtcagcgattcctcgcagaacagggctacgcctaccggatc
accgacgccgatgacctgctcggacctgcaatcggctga
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