Rhizobium esperanzae: AMJ99_CH00026
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Entry
AMJ99_CH00026 CDS
T05681
Name
(GenBank) double-strand break repair helicase AddA type protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rez
Rhizobium esperanzae
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_CH00026
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMJ99_CH00026
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AMJ99_CH00026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ANL01642
LinkDB
All DBs
Position
complement(22489..26040)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSDQTALPTDDDPGAWIGWTTIQQAIASDPERSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSTILCLTYTKAAASEMSNRVFERLADWVMLDDEDLSRRIMQIEGTAPDALKLAEARRL
FARALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGSTLAQAFAYVLNLGDESGLENLLADIVANRNAIRRFTAAAERRGGVEAVLRDRLG
LAVGDTESRIAAQYWPLPELSGGMLELYLSLADHKGGAKAQEVAYGLRLAGRERDDARRA
EMLEKIFLTAKGEPKSDSQFLVKAMLAEAPQLTGAIAAARAHIAASRDRLKLMRMFGATQ
AALVLAARLNHDYEELKKQRSQLDFEDLITRTADLLTRSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPVVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDQIFSTSDNARGLSAVGEPVVHRSSRIGHP
GAVDLWEMIAPEAVVKDEDWTAPFDATPESAPAAILARRIAHSIGTLVGRETIIDKGKER
VIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEDDIFAIAGLRDDNESVWSHLKRFAADGPERFRAAVERLELF
LRQSRHLSVHDFYARVLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKPFTHTHLPKLRLIET
DADEPPLPAWVPVSDLANSLTQNDAARIQTLAEEEYRRLLYVAMTRAADRLVVCGYRGVR
VNNDTWHMMISAALSEGHPHVEAATFSGPDGEWPGIRWRVPRVERRFERIDRNEARDSQE
ALPEGLLRPLPPQAELPRPLSPSGAGMIVDEDEGGLFVASPLFGEKERSDRSLEKGRLIH
RMLQALPDIPPVERPDAASRYAERAARFWPEAERRRLVDSVLKLMDEEGLQPVLGAEARP
EVSIMGTLTLEDRRYAVSGRIDRLAVLDDCVVILDYKTNRVPPSTEEAIPFAHKAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSEKALGLALAGLKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagaccgcacttccgactgacgacgatcccggcgcctggatcggctggacc
acgatacagcaggcaatcgcctccgatcccgagcgctcggcctgggtctcggccaatgcc
ggttccggcaagacgcatgtcctgacccagcgtgtcattcgcctgctgcttgccggcgcg
cggccttccaccattctctgcctgacctataccaaggccgcggcctccgaaatgtcgaac
cgcgtcttcgaacggctggcggactgggtgatgctcgacgacgaagatctcagtcggcgg
atcatgcagatcgagggtacggcgccagatgcgctgaagcttgccgaggcgcgccggctg
tttgcgagggcgctggaaacgccgggcggattgaagatccagacgatccatgccttttgc
gaagcgctgctgcaccaattcccgctggaggccaatgttgccgggcatttctcggtcctc
gacgatcgcgcggcggcggcactgctttccgatgcacgccgggcgctgctgacggcaacg
gcgccggaagagggcagcacccttgcccaggctttcgcctatgtgctcaatctcggcgac
gaatccgggctggagaacctgctcgccgacatcgtcgccaaccgcaacgcgattcgccgc
ttcacggcggctgccgaacgacggggcggcgtggaggcggttctgcgcgacaggctcggc
cttgccgtgggcgatacggaaagccggatcgcggcgcaatattggccgttgccggagctt
tcgggcggcatgctggagctttatctgtcgcttgccgaccacaagggcggcgccaaggcg
caggaggttgcctatggcctcaggcttgccggccgggagcgggacgatgccaggcgcgcc
gaaatgctggagaagatcttcctgacggcaaaaggcgagccgaaatcggactcgcagttc
ctggtcaaggccatgcttgcggaggcgccgcaattgacgggcgccatcgccgccgcccgt
gcgcatatcgcggcaagccgtgaccggttgaaactgatgcggatgttcggcgccacgcag
gccgcgctggtgctcgccgctcggctgaaccacgattacgaggagctgaagaagcagcgc
agccaactggatttcgaagacctgatcacccgcaccgccgacctgctgaccaggagtggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcatatcctcgtcgacgag
gcgcaggataccagcccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccggtcgtgcgcacgctctttgccgtcggcgacgagaaacag
tcgatctactcctttcaaggagcgcggcccgaacgtttttccgaagagagcgaccggacg
cggcggcgggtctccgacagcgggcagagcttttcttcggtgcggttgccactctccttc
cgctcaactgccgacgtgcttgaggccgtcgaccagatcttcagcacctcggacaatgcg
cgggggctcagcgcggtcggcgaaccggtcgtgcatcggtccagccgcatcggccatccc
ggcgccgtcgacctctgggagatgatcgcgcctgaggcggtggtaaaggacgaggattgg
acggcgcccttcgacgcgacgccggaaagcgcaccggccgcaatcctcgcgcggcggatc
gcccattcgatcggcacgctcgtcggccgtgaaacgatcatcgacaaaggcaaggagcgg
gtcatcgaagccggtgacattcttgtcctggtgcgcaagcgcgatgccttcgtcaatgcg
ttgacacgcgccttgaagcgccgcggcgacattcccgtcgccggcgccgaccgactgacg
ctgaccagccatatcgccgtgcaggatctgctggcgctcggtcgtttcctgcttctgccg
gaggacgatctttcgctcgctgccgtgctcaaaagcccgcttttcgatctttccgaggac
gatatctttgcaatcgccggcctgcgggacgacaacgagagcgtctggagccatctcaag
aggtttgcggccgacggccccgaacgtttccgtgctgccgtcgaaaggctggagctgttt
cttcggcagtcgaggcatctgtcggtccacgatttctatgcgcgcgtgctgggcagccat
ggcgggcggcggcaattccttgcccgtctcggcaccgaggtcagcgatattctcgacgag
ttcctgacctttaccctcgaccacgagagttccggccttcccggtctgcaatccttcatc
tcaacgctggagctcgaagcgccggaggtgaagcgcgagcaggacaaggggcgaaacgaa
gtcaggatcatgaccgtgcatgcctccaagggtcttgaagcaccaatcgtcttcctcgtc
gacggcggctccaagcccttcacgcatacgcatctgccgaagcttcgcctgatcgaaacc
gacgccgacgagccgccgctgcctgcctgggttcccgtctccgacctcgccaattcgctg
acgcaaaacgatgcagcgcggattcagacgctggcggaagaggagtatcgccggctgctt
tatgtcgccatgacgcgggctgcagaccggcttgttgtttgcggctatcgtggcgttcgt
gtcaataacgatacctggcatatgatgatctcagccgcgctgagcgaaggccatccgcat
gtggaggcggccaccttctccggcccagacggggaatggccgggcatccgatggcgcgtg
ccgcgggtggagcggcgcttcgagcgcatcgaccgcaacgaggcgcgcgacagccaggag
gcgttgccggaaggcctgttgcggccattgccgccgcaggctgagctgccccgccccctc
agcccatccggcgccgggatgatcgtcgacgaagacgaaggcggcttgtttgtcgcttcg
ccgctgttcggcgagaaagagcgcagcgatcgttcgctggaaaagggcaggctgatccat
cgcatgctgcaggcgcttcccgacattccaccggtcgaacggccggatgccgcgagccgc
tatgccgagcgggcggcgcggttctggccagaagcggaacgccgccggctcgtcgattcg
gttctgaaattaatggacgaagagggtctgcagccggttctcggggcagaggcccggccg
gaagtttcgatcatgggaacattgacgctcgaagacaggcgctatgcggtctccggccgt
atcgaccggctggccgtgcttgacgattgcgtcgtcattctcgactacaagaccaatcgg
gtgccaccttcgaccgaggaggcgatccctttcgcacataaggctcagctcgcgatctat
cgtgagatcctggcgccgctctatcccggcaaacgcatcgactgcatgctcgtctatacc
gagaatgcgtcgctctatacgctgagcgaaaaggcgctcggtttggcgcttgcaggactc
aaaacaaagtga
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