Rhizobium esperanzae: AMJ99_CH00058
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Entry
AMJ99_CH00058 CDS
T05681
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
rez
Rhizobium esperanzae
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rez03019
]
AMJ99_CH00058 (hrpB)
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AMJ99_CH00058 (hrpB)
Messenger RNA biogenesis [BR:
rez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AMJ99_CH00058 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
AAA_30
AAA_19
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANL01674
LinkDB
All DBs
Position
complement(58740..61205)
Genome browser
AA seq
821 aa
AA seq
DB search
MTISASLPELPVSHVLPAVAAALAEQRRAVLSAPPGAGKTTLVPLYLLDQPWRGDGKIIL
LEPRRLAARAAASRMASLIGEQVGETIGYRMRLDSRISAATRVEVVTEGVFARMILDDPE
LSGVSTVLFDEFHERSLDADFGLALALDVQSALREDLRILVMSATLDVERVAALLDHPPV
IESLGRSFPIDVRYRDRPGGERIEDAVTRAIIEAHADEEGSILAFLPGQAEITRTAERLQ
GRFGPETLIAPLYGNLSQKEQDAAIRPAPKGTRKIVLATSIAETSITIDGIRIVIDSGLQ
RLPVFEASTAITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHQGQTAALPAFTPPQIL
SSDLSGLVLDLAHWGVQDPASLAFVDQPPEKTLKEARALLGQLGALDKDGALTVRGKMMR
DLALPARLAAMVVSSGESGHAREAAMIAVLLTEQGLGGPSIDIEDRLRRFKAERGERADA
SRRLAGRLAAGLDTVTRAAPVLAGQLLLHAFPDRIALQRGGRGRFVMANGRGAELPETER
LAGSQMLVIADLTGRAAQGRILAAAEVTRADIEAELPGEIRTDDQTFFDRQSRQVRARRA
TRLGAIVFEETPLPRPSGAAITQALMEGVRELGLDQLAFSKEALQLRERIGFLHRTIGDP
WPDVSDDALLSRLEEWFAPFQEDARSLSEISAAGLTNGLMSLVPHELQRDLSRLAPTHFE
APTGQRHPIQYEGEEPILTIRVQELFGLKQHPAVAGGRLPLLLELTSPAHRPIQTTRDLP
GFWAGSWKDVRAEMRGRYPRHPWPERPEEALPTTRAKPRGT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcagtgcatcattgccggagcttccggtttcgcatgtcctgcccgccgtcgcg
gcggcactggccgagcagagacgcgccgttctttccgctccgccaggcgccggcaagacg
acgctggtgccgctctacctgctcgatcagccctggcgcggcgacggcaagatcatcctg
ctcgaaccgcggcggctggcggcgcgagccgcagccagccggatggcgtcgctcatcggc
gaacaggtgggcgagacgatcggctaccgcatgcgcctcgacagcaggatatcggcggcg
acccgggtcgaagtcgtgaccgaaggggttttcgcccggatgattctcgacgatccggag
ctttcaggcgtctcgaccgtgcttttcgacgaattccatgagcggtcgctcgatgccgat
ttcgggctggcgctggcgctcgacgtgcagtcggcgctgcgcgaggatctgcgcatcctg
gtgatgtcggcgacgctcgacgtggagcgtgtggccgccctgctcgatcacccgcctgtc
atcgagagcctggggcgcagctttccgatcgatgtccgctatcgggaccgccccggcggc
gaacgcatcgaggatgccgtcacccgagcgattatcgaagcacatgccgacgaggaaggc
tctatcctcgccttcctgcccggccaggcggaaatcacgcgcaccgcagagcgcctgcag
gggcgattcgggcctgaaaccttgattgcccctctctacggcaatctcagccagaaggag
caggatgcggcgatccggcctgcacccaaaggaacgcgcaagatcgtccttgccacctcg
atcgccgaaacctcgatcaccatcgacggcatcaggatcgtgatcgacagcggattgcag
cggctgccggtctttgaggcctcgaccgcaattacgcggctcgagacggtgcgggtgtcg
cgggcctccgccgatcagcgggccggccgcgcgggacgaacggagcccggcatcgccatc
cggctttggcatcaggggcagacggcggcactgccagccttcacgccgccgcagatccta
tccagcgacctctccggcctggtgctcgatctcgcgcattggggcgtccaggatccggca
tcgcttgccttcgtcgatcagccgccggaaaagacgcttaaggaagcgcgggcgctgctc
ggccaactgggagcgctcgacaaggatggcgcgttaaccgtccgcggcaagatgatgcgc
gatctcgctctgccggcgcggcttgccgccatggtcgtctcatcaggcgaatcgggccat
gcccgggaggcggcgatgattgccgtgctcctgaccgaacaggggcttggcggaccgagc
atcgacattgaggaccggctgcggcgcttcaaggctgagcgcggcgaaagagccgatgcc
tcgcggcggctggcggggcggctggctgccggcctcgataccgtcaccagggccgcacct
gtactggcgggtcagcttctgctgcatgccttcccggatcggatcgcgcttcagcgcggc
gggcgcgggcgattcgtgatggcgaacgggcggggagcggaactgccggaaaccgagagg
ctcgccggcagccagatgctcgtcatcgccgatctcaccggacgcgcggcacaggggcgg
attctggcggcggccgaagtgactcgtgcggatatcgaagccgaactgcctggcgagatc
agaaccgatgaccagacattcttcgaccggcaaagccggcaggtgcgggcgcggcgggca
acccggctcggcgcgatcgtcttcgaagagacgccgttgccgcgtccttccggggccgcc
atcactcaggcgctgatggagggcgtgcgcgaactggggctcgatcagctcgccttctcg
aaggaggccctgcagcttcgcgaacggatcggtttccttcatcggacgatcggtgatccc
tggcccgatgtcagcgacgatgctctgctttcccggctggaggaatggttcgctcccttc
caggaagacgcccgcagcctctccgagatttctgcggcaggactcacgaacgggctgatg
tcgctggtgccgcacgagctgcagcgcgatcttagccggcttgcgccgacgcatttcgag
gcgccgaccggtcaaagacatcctatccaatatgagggcgaggagcccatcttgacgatc
cgggtgcaggagttgttcgggctcaaacagcatccagcggtcgccggaggccgcctgccg
ctgctcctggagctgacgtcgccggcgcaccggccgatccagacgacgcgcgacctgccc
ggtttctgggcgggctcgtggaaggacgtacgcgccgagatgcgtggacgctatccgcgc
catccctggccggagcggccggaagaggcgttaccgacgacacgggcaaaaccacgtggt
acatga
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