Rhizobium esperanzae: AMJ99_CH00097
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Entry
AMJ99_CH00097 CDS
T05681
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rez
Rhizobium esperanzae
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rez03016
]
AMJ99_CH00097
Enzymes [BR:
rez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMJ99_CH00097
Transfer RNA biogenesis [BR:
rez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMJ99_CH00097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANL01706
LinkDB
All DBs
Position
106676..107302
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AA seq
208 aa
AA seq
DB search
MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKEAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTNPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDVDVSKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLIRDGRFDH
ATACFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgttatcacgaaggcgatatttccgcggccgacgcggcccgctac
accggcgcgattgcgatcgataccgagacgctgggcctggtgccgcggcgggatcgtctc
tgcgtcgtccagctttctcccggtgacggcaccgccgacatcatccgcatcgccgccggc
cagaaagaggcacccaatctcgtcgctcttctcgaagatcccacgcaccagaagatcttt
cattacggccgcttcgatatcgccgtgctcttccacaccttcggcgtcacgaccaacccg
gtgttctgcaccaagatcgcctcgcgcctctgccgcacctacaccgatcgccacggcctc
aaggacaatctcaaggaaatgctcgacgtcgatgtctccaaggcgcagcaatcttccgat
tgggcggccgagacgctgtcgccggcccagctcgaatatgccgcttccgacgtactttat
ctgcacgcgcttcgcgacaagctgacggcccgcctgatccgcgacggccgattcgaccat
gccacggcctgctttgcattcctgccgacccgcgccaagctcgatcttctcggctgggaa
gaggccgacatcttcgctcacagttga
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