Rhizobium esperanzae: AMJ99_CH00587
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Entry
AMJ99_CH00587 CDS
T05681
Name
(GenBank) DNA helicase UvrD-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rez
Rhizobium esperanzae
Pathway
rez03420
Nucleotide excision repair
rez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMJ99_CH00587
03430 Mismatch repair
AMJ99_CH00587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_CH00587
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMJ99_CH00587
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJ99_CH00587
MMR (mismatch excision repair)
Other MMR factors
AMJ99_CH00587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ANL02182
LinkDB
All DBs
Position
complement(599244..601304)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRNVLGSNAGVMADALAWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLINLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWEKQLRELFACYVEAKQSQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPPANIVTLDR
NYRSTQPILTAANAVIDLASERFTKNLWTERQSSERPRLVTVRDEAEQARYVADKVLDNR
EEGLKLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMSEDASPLSALAAMPAPPRSGEDWTDFVSMLQE
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSDAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccccagcagcgcatggccgtcgagcacggcacgctcacc
gacggcagccacattgccgggccgctgctggtcattgccggcgccggctcgggcaagacg
aatacgctggcgcatcgggtcgcccatctgatcgtcaagggcgccgatccgcgccgcatc
ctgctgatgaccttttcacgccgggccgccgccgaaatggcgcgccgcgtcgagcgcatc
tgccgcaacgtgctcggttcgaatgccggcgtaatggccgatgcgcttgcctggtccggc
accttccacggcatcggcgcgcggctcttacgcgactatgcccagcagatcggcctcgat
gccgatttcaccatccatgaccgcgaagacagcgccgatctgatcaacctgatccgccac
gatctcggcttctccaagacggaaagccggtttccggccaagggcacctgccttgccatc
tattcgagggcggtgaattcggaaaccgccctcgaccaagtgctgcgcgacgcctttccc
tggtgcgcggcgtgggaaaaacagctgcgcgagcttttcgcctgctatgtcgaggccaaa
cagagccagaatgtgctcgattacgacgaccttctgctctactgggcgcagatggtcggc
gagagcgtgattgcagaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacaccaaccggctgcaggcctcgatcctgatggcgctgaagccccaaggccagggc
ctgaccgtcgtcggcgacgatgcgcagtcgatctattccttccgcgcagcgacagtgcgc
aacatcctcgattttcccgcagccttcagcccgcccgccaatatagtcacgctcgaccgc
aactatcgctcgacgcagccgattctgacagccgccaatgccgtcatcgatctcgcctcg
gagcgcttcaccaaaaatctctggaccgagcggcaatcctccgagcggccgcgcctcgtg
acggtgcgcgacgaggccgagcaggcgcgttacgtcgccgacaaggtgctcgacaatcgc
gaggagggcctcaagctcaagcagcaggcggtgctgttccgcgcatcgcatcacagcggt
ccgctggaggtcgagctgacccggcgcaatattcccttcgtcaagttcggcgggctgaag
tttctcgacagcgcccatgtcaaggacatgctggcggcgcttcgctttgcgcaaaatccg
cgcgaccgagtggcgggcttccggctgatgcagatcctgccgggcgtcggcccctcgacg
gcccagaaggcgctcgacctgatgtccgaggatgcgagcccgctgtcggcgctggccgcc
atgccggcgccgccgcgctccggcgaagactggactgatttcgtttcgatgctgcaggag
atgaaatccggcaaggccggctggccggcggaaatcgagctggcgcggcaatggtacgcg
ccgcatctggaacggctgcatgaggatgcggcgacgcggcaggccgatttgttgcagctc
gagcagattgccggcggttatgcctcgcgcgagcgtttcctcaccgaactcaccctcgat
ccgccggatgcgacgagcgatcaggccggcgtgccgctgctcgacgaggattatctcatc
ctctcgaccatccactcggccaagggccaggaatggacgcgggtcttcatgctgaatgtc
gtcgacggctgcattccgagcgatcttgccgtcggcgccaccgccgaaatcgaggaagag
cgccggctgctctatgtggcgatgacgcgcgcccgcgacggtctcgacctcgtcgtgccg
cagcgcttcttcacctacgggcagaatgcgcagggcgaccggcacgtctatgcctcgcgc
agccgcttcattccggcgaccctgctgcaattcttcgaggcctgcagctggccgcaggtg
aaatcggatgccgccgcgcaagcccaggcgcggcaggtgcgcatcgatgtcggcgcccgt
atgcgcggcatgtggcggtaa
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