Rhizobium esperanzae: AMJ99_CH01753
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Entry
AMJ99_CH01753 CDS
T05681
Name
(GenBank) ribonuclease E/G protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rez
Rhizobium esperanzae
Pathway
rez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ99_CH01753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rez03019
]
AMJ99_CH01753
03009 Ribosome biogenesis [BR:
rez03009
]
AMJ99_CH01753
Enzymes [BR:
rez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AMJ99_CH01753
Messenger RNA biogenesis [BR:
rez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMJ99_CH01753
Ribosome biogenesis [BR:
rez03009
]
Prokaryotic type
rRNA processing factors
AMJ99_CH01753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
zf-CCHC
Motif
Other DBs
NCBI-ProteinID:
ANL03326
LinkDB
All DBs
Position
complement(1745871..1748744)
Genome browser
AA seq
957 aa
AA seq
DB search
MADKMLIDASHEEETRVVVVRGNRIEEFDFESQHKKQIRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPLADRQALLRAEAEEHRRDEDVEHVETAPMVDLSTQDQP
DVGIVPPEAPEPVAAADETATGEGAAAPEVVASPKAAEEAPAKKAKPRRSRKKVAETTAT
EDAVPTDVEAEGASSVDNDDDAPVGGTMAAMVETDAISEDIDTSKRRHDDDDDDDDHGEE
EVIESVGAEDAMEEVPDRVQRKPRKQYRIQEVIKRRQILLVQVAKEERGNKGAALTTYLS
LAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIARMLEVPQGMGVILRTAGANRTKVEV
KRDFEYLMRLWENVRTLTLASTAPCLVYEEGSLIKRSIRDLYNKDIGEIIVAGEEGYREA
KDFMKMLMPSHAKVVQPYRDIHPIFSRSGIEAQLDRMLQPQVTLRSGGYLIMNQTEALVS
IDVNSGRSTREHSIEDTALQTNLEAAEEIARQLRLRDLAGLIVIDFIDMEEKRNNRAVEK
KLKECLKNDRARIQVGRISHFGLLEMSRQRIRASVLESTTQVCSHCGGTGHVRSQSSVAL
HVLRGIEEYLLKNTTHNITVRTTPDIALYLLNHKRQTIVDYEARFGVAIIIDADGSVGAQ
HFAIDRGEPVENPVKIESLFNFAAIPEDEDDDIVIEADEDEDEELEEKAAATERPAAARS
EGEGEGNRKRKRRRRRRGRNGNAEQPAAAAGEAGDEEEDGDDAGAEGDETAAAAPESRAE
NEESQRRKRRRRGKRGGRRNREDGSELTANEAGEDNGSEDEDDGTSDDVAPGEAAIVETV
AEQADESQAVTAAVEDVAVVAEEVKPARGRGRRKPAAAPVEEPVAESAPAVEAEPEVVEA
SADLATPAQEEAKPVRANRESNISSSEPTVKSTRTENGESDEGKPKKAGWWQRRGFF
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaatgcttatcgatgcgtctcacgaggaagagacgcgcgtcgttgtcgtt
cgcgggaaccgcatagaagaatttgacttcgagtcgcagcacaagaagcagatccgcggc
aatatctatcttgcaaaggtaacgagggtcgaaccctcgctgcaggccgctttcgtcgat
tacggcggcaaccggcacggcttcctggccttcgccgaaatccatcctgattattaccag
attccgctcgccgaccgtcaggcgctgcttcgggccgaggccgaggagcaccgtcgcgac
gaagacgtcgagcacgtcgaaaccgcgccgatggtcgacctttcgacccaggaccagccg
gatgtcggtatcgtgccgccggaggcgccggagccggttgccgcagccgacgagacagcg
accggagagggtgctgcagcgccggaggtcgtagcttcgcccaaggccgccgaagaagcc
ccggccaagaaggccaaaccacgccgcagccgtaagaaggtcgccgaaacaaccgcgacg
gaagacgccgttccgaccgacgtcgaagcggaaggcgcttcgagtgtcgacaacgacgat
gatgcccctgtcggcggcacgatggccgcgatggtggaaaccgacgccatctccgaggat
atcgacaccagcaagcgtcgccacgatgacgacgatgacgatgatgatcacggtgaagag
gaagtcatcgaatccgtcggcgccgaagacgcgatggaagaggtgccggaccgcgtgcag
cgcaagccgcgcaagcagtatcgcatccaggaagtcatcaagcgccgccagatcctgctg
gttcaggtcgccaaggaagagcgcggcaacaagggtgccgctctcaccacctatctctcg
cttgcaggccgctattcggttctgatgccgaacacggcgcgcggcggcggcatttcccgc
aagatcaccaatccgcaggaccgcaagcgcctgaaggaaatcgcgcgcatgctcgaagtg
ccgcagggcatgggcgtcatcctgcgcaccgccggcgccaaccgcaccaaggtcgaggtc
aagcgcgatttcgaatatctgatgcgcctgtgggaaaatgtccgcacgctgacgctggcg
tcgaccgccccctgcctcgtctatgaagagggctcgctgatcaagcgctcgatccgcgac
ctctacaacaaggacatcggcgagatcatcgttgccggcgaggaaggctatcgtgaagcg
aaagacttcatgaagatgctgatgccgagccatgccaaggtggttcagccctaccgcgac
atccacccgatcttctcgcgttccggcatcgaggcgcagctcgaccgcatgctgcagccg
caggtgacgctgcgttccggcggctacctgatcatgaaccagacggaagcgctggtctcg
atcgacgtcaactccggccgctcgacgcgcgaacactcgatcgaggacaccgcgctgcag
acgaacctcgaagccgcggaagaaatcgcccgccagcttcgcctgcgcgacctcgccggc
ctgatcgtgatcgacttcatcgacatggaagagaagcgcaacaaccgcgccgtcgagaag
aagctgaaggaatgcctgaagaacgaccgcgcccgcattcaggtcggccggatctcgcat
ttcggcctgctcgaaatgtcgcgccagcgcatccgcgcttccgttctcgaatcgaccacc
caggtctgctcgcattgcggcggcaccgggcacgtccgttcgcagtcctccgtcgcgctg
catgtgctgcgtggcatcgaggaatatctgctcaagaacacgacgcacaacatcaccgtg
cgcaccacgcccgatatcgcgctctacctgctcaaccacaagcgccagacgatcgtcgat
tacgaagcgcgctttggcgtagcgattatcatcgatgctgacggttcggtcggcgcgcag
cacttcgcgatcgaccgcggcgagcccgtggaaaacccggtcaagatcgaaagcctcttc
aatttcgcagccatccccgaggatgaggacgacgacatcgtcatcgaggctgatgaggac
gaagacgaagaactcgaggaaaaggctgccgcgaccgaacgtcccgctgcggcgcgttcg
gaaggcgaaggtgaaggcaaccgtaagcgcaagcgtcgccgccgccgtcgtggccgcaac
ggcaatgccgagcagccggcagccgctgcaggcgaagccggcgacgaagaggaagacggc
gacgacgcgggcgccgagggcgacgaaaccgccgccgcggcacccgagagccgcgccgaa
aacgaggaatcgcagcgccgcaagcgccgtcgccgcggcaagcgcggcggtcggcgcaac
cgggaggacggctccgagctgacggcgaatgaagccggcgaagacaacggcagcgaggat
gaagacgacggcacttcggatgacgtcgctcccggtgaagccgcaattgtcgagacggtt
gccgaacaggccgacgagagccaagctgtaacggctgccgtcgaggacgtggctgtcgtc
gccgaagaggtaaagcctgcccgtggccgcggccgccgcaagcccgccgcagcgccggtc
gaagaaccagtcgcggaatcggcacccgccgtagaagcagagccggaggtggtcgaagcc
tccgccgatctcgcaacgcccgcgcaggaagaagcaaagccggttcgcgccaaccgcgaa
tccaatatttcttcctcagagccgacggtgaaatccacccgtaccgaaaatggcgaaagc
gacgaaggtaagccgaagaaagccggctggtggcagcgccgtggcttcttttga
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