Rhizobium esperanzae: AMJ99_CH03114
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Entry
AMJ99_CH03114 CDS
T05681
Name
(GenBank) ATP-dependent DNA helicase protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rez
Rhizobium esperanzae
Pathway
rez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ99_CH03114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rez03019
]
AMJ99_CH03114
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_CH03114
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMJ99_CH03114
Messenger RNA biogenesis [BR:
rez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMJ99_CH03114
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMJ99_CH03114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
ANL04636
LinkDB
All DBs
Position
complement(3083177..3084490)
Genome browser
AA seq
437 aa
AA seq
DB search
MPRVALTATADPHTRDDIIERLGLGNAEIFTTSFDRPNIAYEIVERDQPRQQLLRFLSGH
KGDSGIVYCLSRAKVEDTADWLNGQGIRALPYHAGMDRALRDSNQDAFLKEENLCLVATV
AFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDE
GNAADEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVETWEGT
EAAIKALAAVYRTGERFGAGHVIDVLVGNINEKTERFGHVNMPVFGAGKDIPARTWQSVY
RQLLAMGLIRIDHEAYGALKLESEARAVFKQERQVFFRKDRPASERRTKKAERSERKSGL
SGADGTLFEALRAERMSIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLGISGVGQSKL
ERYGDAFLEIILSHDKD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcgtggcgctgacggcaacggccgacccgcatacgcgtgacgatatcatcgag
cggctggggctcggcaatgccgaaatcttcaccaccagcttcgacaggccgaatattgcc
tatgaaatcgtcgagcgcgaccagccgcgccagcagcttctgcgcttcctgtccggccac
aagggcgacagcggcatcgtctactgcctgtcgcgcgccaaggtcgaggacacggccgac
tggctgaacgggcagggcatccgcgcgctgccctatcacgccggcatggaccgggcactg
cgcgacagcaatcaggatgctttcctgaaagaagagaacctctgcctggtcgcgaccgtc
gccttcggcatgggcatcgacaagccgaatgtgcgctatgtcgcccatctcgacctgccg
ggttcggtggaagcctattaccaggagaccgggcgcgccggccgcgacggcctgccgtcc
gaggtctggatggcctatggcatggccgacgtcatccagcgccgccgcatgatcgatgag
ggcaacgctgcagacgaaatcaagcgggtcgagcgcgccaagctcaacgccttgctggcg
atctgcgaaaccgcctcctgccgccggcaggcgatccttgcccatttcggcgaggcgcat
gccggccaatgcggcaattgcgacacctgcctgaagccggtcgagacctgggaaggcacg
gaagccgcgatcaaggcgctcgccgccgtctaccgcaccggcgagcggttcggcgccggt
catgtcatcgatgtgctggtcggtaacatcaacgaaaagaccgagcgtttcggccatgtg
aatatgccggtcttcggcgccggcaaggacattccggcgcgcacatggcaatccgtctac
cgccagctgctcgccatgggactgatccgtatcgatcatgaggcctatggggcgctgaag
ctggagtcggaggcgcgcgccgttttcaagcaggaacggcaggtcttcttccgcaaggac
cggccggcctccgaacggcgtacgaagaaggccgagcgcagcgagcgcaagtcgggcctg
tcgggcgccgacggcacgcttttcgaggcgctgagagccgagcgcatgtcgatcgccaaa
tcgctcggcgtaccgccctatgtcgtcttccccgatacgacgctgatcgcttttgcgacg
gaacggccgcgcagccgcaaggaattgctcggcatatcgggcgtcggacaatcgaagctc
gagcgttatggcgacgctttcctggagatcattctctcgcacgataaggattga
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