Rhizobium esperanzae: AMJ99_CH03122
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Entry
AMJ99_CH03122 CDS
T05681
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rez
Rhizobium esperanzae
Pathway
rez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ99_CH03122 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rez03019
]
AMJ99_CH03122 (recQ)
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_CH03122 (recQ)
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMJ99_CH03122 (recQ)
Messenger RNA biogenesis [BR:
rez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMJ99_CH03122 (recQ)
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMJ99_CH03122 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ANL04644
LinkDB
All DBs
Position
complement(3094048..3096075)
Genome browser
AA seq
675 aa
AA seq
DB search
MKIHSEVAVYGASIAPDALAASEAVDRMNGSSCTHRRRGSLEVIDSKIADFSRYIAGGMA
TSRNNTMTCSPELVDPLQVLRNVWGYPEFRGMQPDVVNNVISGRDTLVLFPTGKGKSLCF
QLPALCMPGTAVVVSPLVALMRDQVEELKELGVVAGALWSEQSPAEAAEVKSRLRAGEMK
LLYVTPERVAAGGLRSMLGPDGLSLIAVDEAHCISFWGNNFRKDYLALGRLKELYPGVPI
VALTATADPHTQKDIVKLLNIAGAEVYVDSFDRKNISYEILPRSNPRAQLLDFLKRHEGE
SGIVYCLSRKKVEETVEWLNENGVRAKHYHARLDPAVKAANQDAFRLEEGLCLVATVAFG
MGINKPNVRYVAHLDLPSSVEGYYQETGRAGRDGLPSEAFMVFGMQDIVQRGRMIDEGDA
SDQVKRIERAKLNALVGICETTACRRQAILGHFGEQHPGNCGNCDTCTKPIETWDGSDAA
IKALAAIYRTGERFGVGHVIDVLVGKVTEKTKRFGHVDLAVFGAGKEFSAASWQSIYRQL
LALNLIRVEHDEFGAMKLQESAAAVFKKERSVTLRRDRSVTRGAKRAADTSSYSSRSGLS
ADDRELFEVLRQERLTISRELGVAPYVIFPDTTLVAFSTRRPSSLDEMLEISGVGPTKLQ
RYGQRFLDALEVALR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccattccgaagtcgcggtatacggcgcatcgattgcacccgacgcgcttgcg
gcgtcagaagctgttgataggatgaacgggtcgagttgtacgcaccgccggcgtggtagc
ctagaggtgatcgattccaagatcgcggatttttcaagatacatagcgggtggaatggcg
acgtcgcgaaacaacacaatgacttgctctccagaacttgtcgatccgttgcaggtgctt
cggaacgtatgggggtatcctgaatttcgcgggatgcagcctgatgttgttaacaacgtg
atatcaggacgcgacacgcttgttctgtttccaacgggcaagggcaagtcgctatgcttt
caactcccggcactttgcatgccgggcacggcggtggtcgtctcgccgcttgtcgctctc
atgcgagatcaggtcgaggagttgaaggaactgggcgtcgtcgcgggcgcattgtggtcg
gagcagtctccggccgaggcggcggaggtcaagagtcgcctgcgcgccggcgagatgaag
ctgttgtacgtcactcctgaacgggtcgcggccggtggactgcgatcgatgctcggacct
gacggcctgtccctgatcgcagtggacgaggcgcattgcatcagtttttggggaaataat
ttccgcaaagactacctcgcgcttgggcgtctcaaggagttgtaccccggcgttccgatc
gtagcgctcaccgccacggcggatccgcacacgcagaaagacatagtcaagctgctcaac
atcgccggcgccgaggtctacgtcgacagcttcgatagaaagaatatcagctacgagata
ctccctcgaagcaatccgcgggcccagcttctggacttcttgaagaggcatgaaggcgaa
agcggcatcgtatactgtctttcgcgcaagaaggtcgaggaaacggtcgagtggctgaac
gagaacggcgtccgcgcgaagcactatcatgccaggctggacccggcggtcaaagcggcc
aaccaggacgccttccgtctggaggaagggctctgcctggtggccaccgtggcgttcggc
atgggtatcaacaagccgaatgtgcgctacgtcgcccatttggatctgccatcgtcggtc
gaaggctactatcaggaaacgggacgcgctggtcgtgacggtcttccatccgaggcgttc
atggtgttcgggatgcaggacatcgttcaacgcgggcggatgatcgacgagggcgacgcc
tcggatcaggtcaaaaggattgagcgcgccaagctcaatgcacttgtcggcatctgcgag
acgaccgcctgccgccgacaggcgatcctcgggcacttcggcgagcagcatcccggcaac
tgcggcaactgcgacacgtgcactaagccgatcgagacttgggacggaagcgacgccgcc
atcaaggcgctcgctgcgatctaccggacaggcgaacggttcggcgtcggccacgtcatc
gacgtcctcgtcgggaaggtgaccgaaaagaccaagaggttcggtcacgtcgaccttgcg
gttttcggagcgggcaaggaattcagcgctgcaagctggcagtcgatatacaggcagctt
ctcgctctgaacctcattcgcgtcgagcacgatgaattcggtgccatgaaactacaggaa
tcggccgccgccgtgttcaagaaggaacggtcggtgacgctcaggcgcgaccggtccgtg
acgcggggcgcaaagcgggcggcagacacgtcaagttattcgtcccgctccggcctttcc
gcagacgatcgagaactcttcgaggtgctccggcaggaacgcctcacgatttcccgagag
cttggcgtcgcaccgtacgtgattttcccggatacgacccttgtagccttttcgacgcgc
cgtccatctagcctggatgagatgcttgagatatccggcgtcgggccgacgaagctccaa
cgctacggacagcgcttcctggacgctctcgaagtggctttacggtga
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