KEGG   Rhizobium esperanzae: AMJ99_CH04409
Entry
AMJ99_CH04409     CDS       T05681                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rez  Rhizobium esperanzae
Pathway
rez03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rez00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMJ99_CH04409 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rez03021]
    AMJ99_CH04409 (rho)
   03019 Messenger RNA biogenesis [BR:rez03019]
    AMJ99_CH04409 (rho)
Transcription machinery [BR:rez03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AMJ99_CH04409 (rho)
Messenger RNA biogenesis [BR:rez03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AMJ99_CH04409 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 DUF6360 AAA
Other DBs
NCBI-ProteinID: ANL05894
UniProt: A0ACD7KG93
LinkDB
Position
complement(4473451..4474716)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELEIPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNSDFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagcaaatccccgacggatcttctggctttc
gccgaatcgctcgaggtcgagaatgcaagcacgatgcgcaagcaggagctgatgtttgcg
atcctcaaaatgcttgccagccaggatgtggaaatcatcggcgaaggggtcgtcgaggtg
ctgcaggacggtttcggcttcctgcgttcggcgaatgcaaactacctgcccggtcccgac
gacatctacatctcgccgtcgcagatccgccgtttctcgctgaaaaccggcgacacggtc
gagggaccgatccgcgggccgaaggaaggcgagcgttatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggaaaagattcgtcacaaagttcatttcgacaacctgacg
ccgctctacccgaacgagcgcttcaaaatggaactcgagatcccgacctccaaggatctg
tcgccgcgtgtgatagacctggtagcaccgctcggcaagggccagcgcggactgatcgtc
gcgccgccgcgcaccggtaagaccgtgcttctccagaacatcgcgcattcgatcacggcc
aaccatccggaatgttatctcatcgtccttctgatcgacgagcgtcccgaggaagtgacc
gacatgcagcgctcggttcgcggcgaggttatctcctcgaccttcgacgagccggcggtg
cgtcacgtccaggtggccgaaatggtcatcgaaaaagcaaagcgtctggtcgagcatggg
cgcgacgtcgtcatcctgctcgattcgattacacgtctcggccgcgcctataacacggtc
gttccctcctccggcaaggttctgacgggaggcgtcgacgccaacgcgctgcagcggccg
aagcgcttcttcggcgcggcgcgcaacatcgaggaaggcggttctctgacgatcatcgct
accgcgctgatcgataccggcagccgcatggacgaagtcatctttgaagagttcaagggt
accggcaactccgagatcgtccttgaccgcaaggttgccgacaagcgcatcttcccggcg
atggatattctgaagtccggcacacgcaaggaagaccttcttgttccacgccaggatctg
cagaagatcttcgttctgcgccgtattctcgcgccgatgggcaccaccgatgcgatcgaa
ttcctgatcgacaaactcaaacagacgaagaacaattcggacttcttcgagtcgatgaac
acctga

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