Rhizobium esperanzae: AMJ99_PC00216
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Entry
AMJ99_PC00216 CDS
T05681
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rez
Rhizobium esperanzae
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rez03032
]
AMJ99_PC00216
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_PC00216
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMJ99_PC00216
DNA replication proteins [BR:
rez03032
]
Prokaryotic type
DNA Topoisomerases
AMJ99_PC00216
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMJ99_PC00216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACT
Motif
Other DBs
NCBI-ProteinID:
ANL06803
LinkDB
All DBs
Position
pRspN561c:244979..246007
Genome browser
AA seq
342 aa
AA seq
DB search
MNAEAITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGQALPKIRRTVLRHL
DTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEISDLPGRQLFVWKDESGALKPVDSGRLNAYLAEISGIPI
SAKTFRTWAGSLAAFGVARERIVGGGRPTVKEMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLTEGGNEPLRGLRAEENRLLDFLTREAELNSSAPCV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagccatcaccgaacttggcctgatctatgtcagcgataccgaaccgggc
atccgcaggcgcaggaaaggcaagggcttcagctatgtgatgccggatggcacaacactt
tccgatgagttgcagcgggcgcgcatcggtgcgctcggcctgccgccggcctacgaaaac
gtctggatctgtctttacgagaacggccatctgcaggcgaccggcatcgatgcgcgcggg
cgcaagcaatatcgctatcacaaggactggcagtccttccgcagtgccggaaagttccac
cagctgatcgaattcggccaggcactgccgaagatccgccgcaccgtcctgcgccatctc
gacaccggtgccgaagacgtcaacggtgtgctggcggctttgacgacgctgctggacgag
gcgcatctgcgagtcggtaaccaggcctatgtcagggagaacggcacctatggcgcgacg
acgctcttgaagcggcatctgaaaatcgttgacgggcgcatcgagctcaaattccgcgcc
aagggcggcaagcgtgtccagcgcagcctcaaacatcccaggctgcagaaaatcctggaa
gagatttccgacctgcccggccgccagctcttcgtctggaaggatgaaagcggcgcgctg
aaaccggtcgattccggccggctgaatgcctatctggccgaaatatcgggcattccgatt
tccgccaagacgttccgcacctgggccggatcgctggcggccttcggtgtcgcccgcgag
aggatcgtcggcggcggccggccgacggtgaaggaaatgtcggaggctgcggccgaggcg
ctgcacaatacgccggcgatctcacgctcgagctatatccatccggccatcattgcgctc
gccggcaatgatcatcctttgaccgagggcggcaacgagccgctgcggggtctgcgggcc
gaagaaaacaggctgcttgatttcctcacccgcgaggccgaactgaactcttcagctccc
tgcgtctag
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