Rhodococcoides fascians D188: A3L23_00221
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Entry
A3L23_00221 CDS
T04328
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfa03016
]
A3L23_00221 (truA)
Enzymes [BR:
rfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A3L23_00221 (truA)
Transfer RNA biogenesis [BR:
rfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3L23_00221 (truA)
Prokaryotic type
A3L23_00221 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMY51582
LinkDB
All DBs
Position
complement(235976..236872)
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AA seq
298 aa
AA seq
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MSSEHDRSGPAISSGDGGPALSVPTRYRLDISYDGTNFSGWARQPGIRTVCGVLEEAFST
VLRQPVELTVAGRTDAGVHATGQVAHFDAVGVPDEHDRLIRRMARFLPADVRVRAITGVS
PDFDARFSAYRRHYEYRFGTALYGVDPLDVAGVVSWPRPIDLDAVREASQALIGLHDFAA
FCKRRDGATTVRELQRFDWEREGDRLTAYVSADAFCWSMVRSLVGAMQTVGEGRRTPDWA
RSLLGRRERASEVAVAPAHGLALVRVDYPPADMLAARNAATRETRPAIVGDECCGGEG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgagctccgagcacgaccgaagcgggcccgccatttcctcaggagatggcgggcccgct
ttgtcggtccccaccagataccggctcgacatctcgtacgacggcacgaacttctccggc
tgggctcggcaacccggtatccgaaccgtgtgtggcgtgctcgaggaggctttctccact
gtgctccgtcaaccggtcgagctgacggtggccggtcgaaccgacgccggagttcacgcg
accggtcaggttgcacatttcgacgccgtgggtgtgccggacgagcacgaccggttgatt
cgaagaatggcgcgcttccttcccgccgacgtccgggttcgtgcgatcacgggggtctcg
cccgacttcgacgctcggttctcggcatatcgccgtcactacgagtaccgattcggcaca
gcgctctacggcgtcgatcctctggatgtcgccggagtcgtgtcctggcctcggccgatc
gatctggacgcggtacgcgaggcgtcgcaggcactgatcggactgcacgatttcgcagcg
ttctgcaagaggcgagacggtgccacgacggtgcgagaactgcagcgcttcgactgggaa
cgcgagggggatcgattgaccgcgtacgtcagcgccgatgcgttctgctggtcgatggtg
cgcagtctggtcggggcgatgcagaccgtcggtgaaggacgacgaacccccgactgggca
cgttccctgctcggtcgtcgagaacgtgcgagcgaggtggcagtggccccggcccacgga
cttgccctggtgcgggtcgactatccacccgccgacatgttggccgcgcgcaatgctgcc
acccgggagactcgaccggcaatagtcggcgacgaatgttgtggaggagaaggatga
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