Rhodococcoides fascians D188: A3L23_00223
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Entry
A3L23_00223 CDS
T04328
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L23_00223 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfa03021
]
A3L23_00223 (rpoA)
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_00223 (rpoA)
Enzymes [BR:
rfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L23_00223 (rpoA)
Transcription machinery [BR:
rfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A3L23_00223 (rpoA)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A3L23_00223 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AMY51584
LinkDB
All DBs
Position
complement(237500..238564)
Genome browser
AA seq
354 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLSLKDSPASFDPSTVPGYDATTGTWSDTDAGSFGDTEGAEQDYAETEQL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgcccgacgctgaccgaagaggtcatcgccgacaaccgctcgaaa
ttcgtcatcgagccgctcgagcccggcttcggttacacactcggcaactcgctccgccgc
accctgctgtcgtcgatccccggcgctgctgtcaccagcatccgtatcgacggcgtcctc
cacgaattcaccaccgttcccggagtcaaggaagatgtcaccgacatcatcctgaacctc
aagggactcgttgtgagctccgaagaagacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgtcaccgcaggcgacatcgtgcctccggccggcgtcacggtgaacaat
ccggatctgcacatcgcgaccctgaacgacaagggcaagttggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtccccgccgttcagaacaaggcatcgggtgccgagatcggc
cgtattccggtcgactcgatctactcgcccgtgctcaaggtcacctacaaggtggaggcc
acccgcgtcgaacagcgcaccgacttcgatcggctcgttctcgacgtggagaccaagaat
tccatcaccgcgcgggacgcgctcgcttcggcgggcaagaccctggttgagctcttcggc
ctcgcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccctcgcccgccgag
gccgatcacatcgcatccttcggactccccatcgaggatctggacctgacggttcgttcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagctggttggtcgtaccgag
tccgatctgctcgacatccgtaacttcgggcagaagtccatcgacgaggtgaaggtcaag
ctgcactcgctcggcctttccctcaaggacagccccgcgtcgttcgatccgagcaccgtg
cctggctacgacgccaccacgggcacgtggagtgacaccgacgcaggctccttcggcgat
accgaaggcgccgagcaggactacgccgagacagaacagctgtaa
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