Rhodococcoides fascians D188: A3L23_00611
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Entry
A3L23_00611 CDS
T04328
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00020
Citrate cycle (TCA cycle)
rfa00640
Propanoate metabolism
rfa00660
C5-Branched dibasic acid metabolism
rfa00720
Other carbon fixation pathways
rfa01100
Metabolic pathways
rfa01110
Biosynthesis of secondary metabolites
rfa01120
Microbial metabolism in diverse environments
rfa01200
Carbon metabolism
Module
rfa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rfa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A3L23_00611 (sucD)
00640 Propanoate metabolism
A3L23_00611 (sucD)
00660 C5-Branched dibasic acid metabolism
A3L23_00611 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
A3L23_00611 (sucD)
Enzymes [BR:
rfa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
A3L23_00611 (sucD)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
FAM171A1-2-B_N
Motif
Other DBs
NCBI-ProteinID:
AMY51969
LinkDB
All DBs
Position
complement(662412..663323)
Genome browser
AA seq
303 aa
AA seq
DB search
MSIFLNKDNKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVKHVDAQGNDIEL
PVFASVSEAMEKTGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY
NVEKGKKTRIIGPNCPGIITPGEALVGITPANISGTGPIGLVSKSGTLTYQMMFELRDFG
FSTAIGIGGDPVIGTTHIDAIEAFEADPDTKVIVMIGEIGGDAEERAADYIKANVTKPVV
GYVAGFTAPEGKTMGHAGAIVSGSLGTAQAKKDALEAAGVKVGKTPSETAALAREILESL
SVK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctttctgaacaaggacaacaaggtcatcgtccagggcatcaccggcggcgaa
ggcaccaagcacaccgccctgatgctcaaggccggcacccaggtcgtcggcggcgtcaac
gcacgtaaggccggaaccacggtcaagcacgtcgacgcacagggcaacgacatcgaattg
ccggtgttcgcttcggtttccgaggccatggagaagaccggagccgacgtgtccatcgcg
ttcgtgccgccggcattctccaaggacgccatcgtcgaagcgatcgacgcggagatcccg
ctgctcgtcgtcatcaccgagggcatccccgtgcaggactccgcatacgcgtgggcctac
aacgtggagaagggcaagaagacccgcatcatcgggccgaactgccccggaatcatcact
cccggtgaggcattggtcggcatcacgcccgccaacatctcgggaaccggccccatcggc
ctggtctccaagagtggcaccctgacctaccagatgatgttcgagctccgcgacttcgga
ttctcgacggccatcggcatcggcggcgaccccgtcatcggaaccacccacatcgacgcc
atcgaggcgttcgaggcggaccccgacaccaaggtcatcgtcatgatcggcgagatcggt
ggcgacgccgaagagcgtgcagccgactacatcaaggccaacgtgaccaagccggtcgtc
ggctacgtcgcaggcttcaccgctcccgagggcaagaccatgggccacgccggcgccatc
gtctccggctcgctgggaacggcacaggcgaagaaggacgcactcgaggccgcaggcgtc
aaggtcggcaagacgccgtccgagaccgctgccctcgcgcgcgaaatcctggaatcgctg
tccgtcaagtag
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