Rhodococcoides fascians D188: A3L23_01002
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Entry
A3L23_01002 CDS
T04328
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A3L23_01002
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
A3L23_01002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfa02000
]
A3L23_01002
Transporters [BR:
rfa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
A3L23_01002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
G3P_antiterm
Motif
Other DBs
NCBI-ProteinID:
AMY52354
LinkDB
All DBs
Position
complement(1082559..1083683)
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AA seq
374 aa
AA seq
DB search
MKTTTWTKALAGIAAASLVLTGCSSSEDTTTGEAADVAGAQAVADQYEAAPTDLVLTTPL
SKAPEEGKYVISIETPQPISSAKNDAIQQAADVLGWRYQRVLMGTDAEAAPKAMDQAIAL
KPDAIHISGTPLTMLSKQIASAEAAGIPVVADSIAGEPVPGVISTALDGDAQVQEWGRMV
ASQVVADSNGEANVAIFSITDYSILNVFTDAFTAQLESQCPDCKVQLVNQQVTDLGTKTP
QSVVSTLQRDPTINYAVFSFGDLVLGVDAALRGASLQDQVTFAGQTPTPDNLQSLKDGDN
SVWVGFPVQILGWRVLDTLARQFNGDDVAEADAAFMPTQLLNKDNIEAAVLDEETGYYVG
VADYQDQFKTLWKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaccactacttggacgaaggcgttggccggcattgccgccgcgagcctggtcctg
accggctgcagcagctcggaggacacgaccaccggcgaggcggcagacgtcgccggtgcg
caggcggtcgccgaccagtacgaggccgcacctaccgatctcgtgctgaccacgccgttg
agcaaggcaccggaggagggcaagtacgtcatcagtatcgagacgccccagcccatctcc
agcgccaagaacgacgccattcaacaggccgccgacgtactcgggtggcgataccagcgt
gttctgatgggtaccgacgccgaagcggcaccaaaggccatggatcaggccattgccctg
aagccggacgccatccacatctccggcacaccgttgacgatgctgtcgaagcagatcgcc
tcggccgaggccgccggcattccggtggttgcggacagcattgcgggagagccggttccg
ggtgtcatctccaccgctctcgacggcgatgcgcaggtgcaggagtggggcaggatggtg
gccagtcaggtggtagcggacagcaacggtgaggccaatgtcgcgatcttctcgatcacc
gactactcgatcctcaacgtcttcaccgatgccttcaccgcgcagctggaaagtcagtgc
ccggactgcaaggttcagctcgtcaaccagcaggtcaccgatctcggaaccaagaccccg
cagagcgtcgtcagcacgctccagcgtgacccgaccatcaactacgcggtcttctccttc
ggggacctcgtcctcggtgtcgatgcggcactgcgcggagcgagcctgcaggatcaggtc
acgttcgccggtcagacgccgacgccggacaacctgcagtcgctgaaggacggcgacaac
agtgtgtgggtaggtttcccggtccagattctcggctggcgtgtgctcgacacgttggcc
cgccagttcaacggtgacgatgtcgccgaagcggacgcggcgttcatgccgactcagttg
ctgaacaaagacaacatcgaggcggcggtgctcgacgaggagaccggttactacgtgggt
gtcgccgactaccaggatcagttcaagacgctctggaagaagtag
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