Rhodococcoides fascians D188: A3L23_01584
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Entry
A3L23_01584 CDS
T04328
Symbol
end
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3L23_01584 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_01584 (end)
Enzymes [BR:
rfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A3L23_01584 (end)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A3L23_01584 (end)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AMY52934
LinkDB
All DBs
Position
complement(1685448..1686224)
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AA seq
258 aa
AA seq
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MMGVMRIGAHVRDSSDPLGTAETLGVDLVQMFLTDPQKWNKLTPHPQGEALLTGDVDVVV
HSSYVLNVASLNNRIRIPSRKAVVEQAAAAAEIGAIGLVVHGGHVREGEDTAKGIDNWRK
LFERQAEQGGFGVPIFVENTAGGDSAMARRFDDIARLWDAIGEFGAGFCLDTCHAWAGGE
DLIDVVDRIKAITGRIDLVHLNNSRDEFDSARDRHANLGTGTIDADILTAVALAADAPVI
LETPAEGIDDDVRLLKSL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcgtcatgcgcatcggagcacatgtccgcgacagcagcgaccctctgggcacg
gccgagacgctcggcgtcgacctggtccagatgtttctgacggatccgcagaagtggaac
aagctcaccccgcacccccaaggtgaggctctgttgaccggagacgtcgatgtggtggtg
cactcgtcctatgttctgaacgtggcgagcctgaacaatcgcatccgaatcccgtcccgc
aaggcggtcgtcgaacaggccgcagcagctgccgagatcggtgcgatcggtttggtggtg
cacggcggtcacgtccgagagggcgaggacaccgccaagggaatcgacaactggcgcaag
ctgttcgagcgtcaggccgagcagggtggtttcggcgtaccgatcttcgtcgagaacact
gccggcggtgactcggcgatggcgaggcgcttcgacgacatcgcgcggttgtgggacgcc
atcggggagttcggtgccggtttctgtctcgacacctgccatgcgtgggccggcggcgaa
gacctgatcgacgtggtcgatcgcatcaaggccatcaccggacgaatcgacctggtgcat
ctgaacaattcacgcgacgagttcgactctgcccgcgaccggcacgcgaacctgggcacc
ggaaccatcgacgcggacattctgacggccgtcgcgctcgccgccgatgcaccggtgatc
ctcgaaactccggccgagggaatcgacgacgacgtgaggctgctgaagagcctgtag
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