Rhodococcoides fascians D188: A3L23_01586
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Entry
A3L23_01586 CDS
T04328
Symbol
ytrF_2
Name
(GenBank) ABC transporter permease YtrF
KO
K02004
putative ABC transport system permease protein
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfa02000
]
A3L23_01586 (ytrF_2)
Transporters [BR:
rfa02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
A3L23_01586 (ytrF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
DUF4134
Motif
Other DBs
NCBI-ProteinID:
AMY52936
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Position
1687022..1689613
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AA seq
863 aa
AA seq
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MSHSVAKKSNPDKAPTRAASGNPMRKVSLRNLAAHKVRLALTVLSVVLGTAFVAGSFVFT
DTLQRTFSSLFADTAQGADVRVAPEDARSSGVPNEDIAAISALPGVRAVSPYVGGQLVLL
GKDGAAVQSGGAPTIGESYLPDEQRLGDPATFVSGSAPTAPGQVAINAGGADRAGLKVGD
ATQVLVPSKGITDITISGIYSTATESGGFIGIQFVQSQANELFTDGAHVQYIDVAGNDLA
AQGKTQSDLRDEIAAAFPDLKVQTAADVQAETKAEVESALSFITYFLLAFGAIALLVGTF
IIYNTFSMIVAQRVRELALLRAIGASRGQVSRSVVLEAVVVGVIGSVLGFAGGVGLAYGL
RALLNAFDLGLPSGPLALEPRTVVVAFAVGIIVTVLSAYAPARRAAKIPPVAAMREEFAS
AGDTLRTRTFIGVGLGIAGAAAIVIGAQSTGGAAAATVGVGAVAAIVATALAAPSLSRPV
VGALGAVLTRPFGAIGRLARTNSVRNPRRTAATAFALMLGLMLVTVIGVLGSTAKASVDS
LVDTGVEADYILSGPQSIGVPAGATAAAQQVDGVERTAVLHPVFVTIAGEEEFGAAIDGS
PEGLLDLSMVRGTADLESNGFSVSETEASTKGWDIGTQVVFDSVDGASVPVTVTGVFTDN
PLIGSWIVSGDIYEKVTPSITRSDLLVLVKAAPGTDLGTLRTDLEAATKPSVVVQVQDVE
EFKGSQGQQIDTLLAVLYGLLALAVVIAVLGIVNTLALSVVERRREIGMLRAIGMQRPQV
RRIIYLESLLIALFGAIVGVALGIAFGWGFVQTLRDEGLGAMTVPWGQVVAMLLGSAVVG
VLAALWPAVRAARTKPLEAIADL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactcggtcgccaagaaatcgaatcccgacaaggccccgacgcgggccgcgtcg
ggcaaccccatgcgtaaggtgtcgctgcgaaaccttgccgcccacaaggttcggctggca
ctgacagttctgtccgtcgtactcggaaccgcgttcgtcgcaggctcgttcgtcttcacc
gacacgctgcagcgcacgttctcgtcactgttcgccgacaccgcacagggagccgacgtt
cgagtcgcccccgaggatgcgcgatcgagcggagtacccaacgaggacatcgccgccatc
tcggcgcttcccggcgtgcgtgccgtctccccgtacgtgggaggacaactcgttctgctg
ggtaaagacggtgccgcagtgcaatccggcggagcaccgacgatcggcgagtcctacctg
ccggacgagcaacggctcggcgatccggcgacattcgtctccggctcggcccccaccgcg
cccggccaggtcgcgatcaacgcaggtggcgccgatcgagcgggcctgaaggtgggcgac
gcaacccaggtcctcgtgccgtccaaggggatcaccgacatcacgatctctggaatctat
tccactgcaacagaatccggtggtttcatcgggattcagtttgtacagagccaggcgaac
gagttgttcaccgacggtgcgcacgtgcagtacatcgacgtcgcgggcaacgatctcgcc
gcacagggcaagacgcagagcgacctcagggacgagatcgccgccgcgttcccggatctg
aaagtgcagaccgctgccgacgtccaggccgaaaccaaggccgaggtcgagtcggcactg
tcgttcatcacgtacttcctgctcgcgttcggtgccattgcactgctcgtcggcacgttc
atcatctacaacacgttctcgatgatcgtcgcccagcgggtacgcgaactggcgctgctt
cgcgccatcggagccagccgcgggcaggtcagtcgctcggtcgtactcgaagcggtcgtc
gtcggcgtcataggaagtgtgctgggcttcgccggcggcgtgggacttgcgtacggattg
cgcgctctgctcaatgccttcgacctcgggttgccgtcgggcccactcgccctcgaacca
cgcaccgtcgtcgtcgctttcgcggtaggcatcatcgtcaccgtcctcagcgcctacgca
ccggcgcgacgggcagccaagattccaccggtggccgcaatgcgcgaggagttcgcgtcc
gccggcgacaccctgcgaacccggacgttcatcggcgtcggactgggtatcgccggagcg
gcagcgatagtcatcggcgctcagtcgaccggcggcgctgccgcagcaaccgtcggcgtc
ggcgcggtggcggcgatcgtggccacggccctggccgcaccgtcgttgtcacggcccgtc
gtgggagcgctcggggccgtcctcacccggccgttcggtgcgatcggtcgcttggccaga
accaactcggtgcgcaatccgcgccgcacggcagccaccgcattcgcgttgatgctcggc
ctcatgctcgtcaccgtcatcggggtactcgggtcgacggcgaaggcgagtgtcgattcg
ctcgtcgacaccggcgtcgaagccgactacatcctgtccggtccacagtcgatcggtgtc
ccggccggagccacggcggccgcacaacaggtcgacggggtggaacgaaccgctgtgctg
catccggtgttcgtcacgatcgccggagaagaagaattcggcgctgccatcgacggttca
ccggaaggactgctcgacctgtccatggttcggggcaccgcagacctcgagagcaacggc
ttctcggtgtccgagaccgaagcgtccaccaagggctgggacatcggcacccaggtcgtg
ttcgactccgtcgacggagcttcggttcccgtcaccgtcaccggcgtgttcaccgacaac
ccactgatcggcagttggatcgtctcgggcgacatctacgagaaggtgacgccgtccatc
acgcggtcggatctgctggtcctcgtcaaagccgcgcccggaaccgacctcggtacgctg
cgcaccgacctcgaggctgcgaccaaaccgtccgtggtggtgcaggtacaggacgtcgaa
gagttcaagggcagccaaggccagcaaatcgacacactgctcgcggtgctgtacggactt
ctcgccctggccgtggtcatcgcggtgctgggcatcgtcaacaccctcgcgctgtcggtc
gtcgaacgtcgacgcgagatcggcatgctcagggcgataggaatgcagcgaccgcaggtg
cggcgcatcatctacctcgagtcgctgctcatcgccctgttcggtgccatcgtcggcgtc
gccctcggcatcgccttcgggtggggcttcgtccagaccctgcgcgacgagggcctgggt
gccatgacggtgccctgggggcaggtcgtcgcaatgcttctcgggtccgcggtggtcgga
gtgctggccgctctgtggcctgccgttcgggccgcgcgcaccaaaccgctggaggcgata
gccgacctctga
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