Rhodococcoides fascians D188: A3L23_01935
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Entry
A3L23_01935 CDS
T04328
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_01935 (phr)
Enzymes [BR:
rfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3L23_01935 (phr)
DNA repair and recombination proteins [BR:
rfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3L23_01935 (phr)
Prokaryotic type
A3L23_01935 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AMY53280
LinkDB
All DBs
Position
complement(2022293..2023513)
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AA seq
406 aa
AA seq
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MSQLPAPPSIADGFTTDDVASWVAEHLGDLTLEGPDNIAPGGIRGGQSAADAALASLDIT
GYARDRSTVLPANRRGASRMSPYIRHGLLTLREVWDAVADAPARDRTRYRDELMWQEYAR
HLYARVGTDLGHSLRREQPRPRNWTSEPWPDEMNCMSAVVGELHSDGWLVNQTRMWLSSQ
WAVRAGATWREGEDEMFTHLLDGSRAANRLGWQWTVGTGSGKVYGFSRWQVNKRAPSLCR
NCALKDACPIENWPDDDLGPAVDGPDLNKAPVPAGPVHVEGDGAEQVWLTAESLGTTDPA
MVANPERPAVFVFDEPLLRKLRLSGKRLVFLAETLGEIASTRPLEVRRGRVSEELSGRSL
AATWAPVPGFSRIADAIAPVELHPWPWLTRPTTSSVRSFSAWRRSH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccccgctcccccgtcgatcgccgacggcttcaccaccgacgacgtcgct
tcctgggttgccgagcatctgggcgacctgacgctcgagggaccggacaacatagctccc
ggtggcattcgcggcggccaatcggcggccgatgccgcgctggcgagcttggacatcacc
gggtacgcccgcgaccgcagcactgtccttcctgcgaatcgccggggagccagtcgaatg
tcgccctacatccgacacggtctgctcaccctccgtgaggtgtgggacgccgtcgcggac
gccccggcgcgtgatcgcacgcgctaccgtgacgagctcatgtggcaggagtacgcacgc
catctctacgcccgggtcggtaccgatctggggcattctctgcgccgtgagcagccgcgt
ccgcggaactggacttccgaaccctggcccgacgagatgaactgcatgtccgcggtagtg
ggcgaattgcacagtgacggttggcttgtcaatcagacacgcatgtggttgtcatcccaa
tgggctgtgcgtgccggcgcgacatggcgcgagggcgaggacgagatgttcacccacttg
ctcgacggctcacgggcggccaaccgcctcggctggcagtggaccgtcggcaccggaagc
ggcaaggtctacggattcagccggtggcaggtgaacaagcgcgcaccttccctgtgccgc
aactgcgcgctgaaggatgcgtgccccatcgagaattggcccgacgacgacctcggaccg
gcagtcgacggcccggatctgaacaaggcaccggtacccgcgggccccgtgcacgtggaa
ggcgatggtgcagaacaggtctggctgaccgccgaatcgctcggcactacagaccccgcc
atggttgcgaatcccgagcgacctgccgtcttcgtgttcgacgaaccactcctgcgcaag
cttcggttgtccggaaagcgactggtgtttctcgccgagaccctcggcgagatcgcgtcg
acccggccgttggaggtacgtcgcggccgagtatcggaggaactttccggacggtctctg
gccgccacctgggcacctgttcccggcttctctcgcatcgccgacgccatcgccccggtc
gaattgcatccatggccctggctgacgcgtcccaccacatcctcggtccggtcgttcagt
gcgtggcggcgcagtcactga
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