Rhodococcoides fascians D188: A3L23_01955
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Entry
A3L23_01955 CDS
T04328
Symbol
gabD2
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00250
Alanine, aspartate and glutamate metabolism
rfa00310
Lysine degradation
rfa00350
Tyrosine metabolism
rfa00650
Butanoate metabolism
rfa00760
Nicotinate and nicotinamide metabolism
rfa01100
Metabolic pathways
rfa01120
Microbial metabolism in diverse environments
Module
rfa_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3L23_01955 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3L23_01955 (gabD2)
00310 Lysine degradation
A3L23_01955 (gabD2)
00350 Tyrosine metabolism
A3L23_01955 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3L23_01955 (gabD2)
Enzymes [BR:
rfa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3L23_01955 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3L23_01955 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3L23_01955 (gabD2)
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Motif
Pfam:
Aldedh
LuxC
Motif
Other DBs
NCBI-ProteinID:
AMY53300
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Position
2039360..2040913
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AA seq
517 aa
AA seq
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MPAPSTATFSRLADLIAIPDADSRPTKTITEVFTGKELATIPVGTAADALAAIARVRTAQ
AAWAKRPVSERAEIFHRYRDLVLAHRDELMDMAQAETGKSRAAALEEVLDISMTSRHYAR
TAAKLLAPKKVTGMLPVLTKTRVRYQPKGVVGIISPWNYPMTLAVSDAIPALLAGNGVVL
KPDSQTPYCALACVELLYKAGLPRDLFAVVPGPGSVVGTAIVENTEYVMFTGSTATGQLL
AEQAGRRLIGFSAELGGKNAMIVAKGANLREVSDAAVRACFSNSGQLCISIERIYVEKSI
AAEFTEKFGQRVRNMTVGADYEFGIEMGSLISEDQIKTVSAHVDDAKVKGATVVAGGKAR
PDIGPLFYEPTLLTNVTEDMECAATETFGPLVSIYPVVDVDEAIAKANDTDYGLNASVWA
KTKAQGEAIAARLHAGTVNVDEGYAPTWGTTGAPMGGMGVSGMGRRHGNEGLLKYTEPQT
IATTRLLNLGGPRGLPPKLWAKIMPPFVKALKYVPGR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctccgtccactgcgaccttttcccggctcgctgatctcatcgccattcccgac
gcggactcgcgtcccaccaagacgatcaccgaggtgttcaccggtaaggagctggcgacc
attccggtcggtacggctgcagatgccctggctgcgatcgcgcgcgtccgtaccgctcag
gcggcctgggccaagcgtccggtctccgagcgcgcagagatcttccaccgctaccgcgac
ctggtgctcgcgcaccgcgacgagctcatggacatggcgcaggccgagactggcaagtcc
cgcgccgccgccctcgaggaagtcctcgacatctcgatgacctcgcggcactacgcacgc
acggccgccaaactgctggccccgaagaaggtcaccggcatgcttcccgtgctgaccaag
actcgcgttcggtaccagcccaagggcgtcgtcggaatcatctcgccgtggaactacccg
atgaccctcgcggtgtccgacgccattccggcgctgctggccggtaacggcgtcgtgctc
aagcccgacagccagacgccgtactgcgcgttggcctgcgtcgagctgctctacaaggcc
ggtctgccccgcgacctgttcgccgtggtccccggccccggctcggtggtgggcaccgca
atcgtcgagaacaccgaatacgtcatgttcaccggctccacggccaccggtcagctcctg
gccgagcaggcggggcgtcgactcatcggtttctccgccgagctcggcggcaagaacgcc
atgatcgtcgcgaagggcgcgaacctgcgggaagtatccgacgcggcagtgcgcgcctgc
ttctccaactccggtcagctctgcatctccatcgagcgcatctacgtcgagaagtcgatc
gccgccgagttcaccgagaagttcggccagcgggtacgcaacatgaccgtgggtgccgat
tacgagttcggcatcgaaatgggcagcctcatctccgaggaccagatcaagacggtctcg
gcgcacgtcgacgacgccaaagtcaagggtgcgaccgtcgtcgcgggcggcaaggcgcgt
cccgacatcggcccgctgttctacgagccgacgttgctgacgaacgtcaccgaggacatg
gagtgcgcggcgaccgagaccttcgggccgctggtgtcgatctaccccgtcgtcgacgtc
gacgaggccatcgcgaaggccaacgacaccgactacggattgaacgcgagcgtctgggcc
aagacgaaggcgcagggcgaggccattgcggcacgtctgcacgcgggcacggtcaacgtc
gacgagggctacgcgccgacgtggggcaccaccggtgcgccgatgggcggaatgggcgtc
tccggaatgggccgcaggcacggaaacgagggactgctcaagtacaccgagccgcagacc
atcgcgacgacccgcctgctcaatctcggtggaccgcgcggacttccgccgaagctgtgg
gcaaagatcatgcctcccttcgtcaaagcgctgaagtacgtacccggccggtag
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