Rhodococcoides fascians D188: A3L23_02032
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Entry
A3L23_02032 CDS
T04328
Symbol
ppsA
Name
(GenBank) Phthiocerol synthesis polyketide synthase type I PpsA
KO
K12437
polyketide synthase 13
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00074
Mycolic acid biosynthesis
rfa01100
Metabolic pathways
rfa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
A3L23_02032 (ppsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfa01004
]
A3L23_02032 (ppsA)
Lipid biosynthesis proteins [BR:
rfa01004
]
Polyketide synthase
Modular PKS
A3L23_02032 (ppsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
AMY53377
LinkDB
All DBs
Position
2116651..2121690
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AA seq
1679 aa
AA seq
DB search
MAEQETDKIQSADGTDLTVAQLRDWLRNWVADATGQPASAISDDRPMEEFGLSSRDAVAL
SGEIEELVGVTLTATVVYQHPTIASLAKIIIEGEPDEPVGTVDDAFYTSGVQSGDAHDIA
IVGLSSRFPGTGHTPEEMWSLLIEGRDGITDLPEGRWKEFTSDPVIAAAVDATVTKGGYL
DDVKTFDAEFFAMSPNEVVNVDPQQRLALELTWEALEHAHIPASSVKGSQVGVFIGSSSN
DYQLIAVSDPAVHPYALTGTSTAIVANRVSYFYDFRGPSIAVDTACSSSLVAVHQAVRSL
RTGESDLAVAGGVNMLLAPPITVGFGQTGVLAPDGRIKAFSSDANGMIRSEGGGLVVLKR
LEDAERDGDQVLAVIAGSAINQDGRSNGLLAPNPDAQADALRFAYRDAGINPSGVDYIEA
HGTGTILGDPIEADALGRVVGRGRDADKPALLGSAKTNFGHLESAAGAAGLIKVVLAMQE
NKLPASLNYVGPNPYIDFDKAHLKVIPEATDWPRYTGKAVAGISGFGFGGTNAHVVVREY
VPGETSAEFDPAAVDPEAAVVEGVYEEQLDAETTSPVAEAETILAESDSAPETVILAVSA
ALPSRRKRAASELADWLETEEGSTTPLVDVGRTLARRNHGRSRAVVLATTTAEAIAGLRA
IAAGKPGPGVFSADSPASNGAVWVFSGFGSQHRKMASRLYRTNAVFAAEVDKVDELLVDE
AGYSIREIILDDSQTYEFENSQVAIFVIQIALAATLRAHGAEPSAVIGHSMGEVAAAYVA
GGLNLEDAVRIIYARSRLLAEGQDGLGAASQGAMALVEYTPDEVKTLTDQFPNVEPCVYA
APTHTTVGGPRAEVEALVEKAEAAGKMARLLDVKGAGHTAAVDVLLGELAAELAGIEPSK
LTAGVYSSVDREAHYRVGHAAIHGVDYWTKGMRHPVWFTQAVNVAVGDGHTTFVELAPNP
VALMSVAATAWAAGLADATLIPTLKRKEDEADTFLSALAQLYVHGHALELATLFESGPYA
AIPRTAYLRKEFWLNSQVSSSGNSRVPGARVALPDGRHVWEVQASAVSGFDALVTAAASQ
VFSDVALGASVSHASVPAAGTVVTTLTSHLGGASVQVHAHEGSAFTLLHEAVVISGDARP
EPVVAVEERSSSPMEELPEVVETFGDRWDPNGNQKLEDRLAIIVAESMGYAPEDLPPEVP
LIELGLDSLSAVRIKNRVEYEFDIPTVQLQAVRDANLREVEKYLRYAIENRDEVQALADK
QAAEKAAEQAAESGATARDAVLETAVAAPETAVPSAEYQPAPVVAAQTDLGGKEAFAEAA
GSDVPPRDNAERMTFATWAVVTKESAKGIFNTLPILDDETAEKLAARLTERAGGEITFDD
VLDSETIEQLADKVRPHLEDGEIDGVVRNLRARPEGSTATPVFAFHSAGSSTVAYEPLLR
KLPAGTPMYGLERVEGPIAKRAAEYVPLIKAIQPEGPYVFVGWSLGGILAYEVARQMEEE
GIEVAYVGLLDTVMPGTKIPDTKDEVRKRWERYAAFAKKTYNVDYPIPYDKLVDSDDEGQ
IRIITDLVKLSGAKIPGGIIEHQRTSWLDNRAIQTAELKEYGGHVTLYLADKYHDDAIAL
EPAYATREEHGGWGPVVKDLEIVYVGGDHLAVVDEPYIGKIAAHLSKTLENIESARTGA
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagagacagacaagattcagagtgccgacgggacggacctcacggtcgcc
caactgcgggattggctacgcaactgggttgcggacgcgacgggtcaacccgcgtcggcc
atctccgacgaccgtccgatggaggaattcggtctgtcctctcgcgatgccgtcgcactg
agcggtgagatcgaggagctggtgggggtcacgctgaccgcgaccgtcgtctaccagcac
cccaccatcgcgtctctggccaagatcatcatcgagggcgaacccgacgagccggtgggt
accgtcgacgacgcgttctacaccagcggagtgcagtcgggcgacgcccacgacatcgcg
atcgtcggactgtcgtcgcgcttccccggcaccggtcacacccccgaggagatgtggtcg
ctgctcatcgagggccgcgacggcatcaccgacctgcccgagggccggtggaaggaattc
acctccgatcccgtcatcgccgcagccgtcgacgcgacggtcaccaagggtggctacctc
gacgacgtcaagaccttcgacgccgagttcttcgcgatgtcgcccaacgaggtcgtcaac
gtcgacccgcagcagcgcctcgcgctggaactgacctgggaagcgctcgagcacgcgcac
atcccggccagctcggtcaagggcagccaggtcggcgtcttcatcggcagctcgtccaac
gactaccagctcatcgccgtcagcgacccggccgtgcacccctacgcactcaccggcacc
tccaccgccatcgtcgccaaccgcgtgtcgtacttctacgacttccgcgggccgtcgatc
gccgtcgacactgcctgctcgtcgtccctcgtggccgtccaccaggcagtgcgcagcctg
cgcaccggcgaatccgatctcgccgtcgcaggcggggtcaacatgctgctcgccccgccg
atcaccgtgggcttcggtcagaccggtgtcctcgctcccgacggccggatcaaggccttc
tcctccgacgccaacggcatgattcgctccgagggcggcggcctcgtcgtgctcaagcga
ctcgaggacgccgagcgagacggcgatcaggtgctcgctgtcatcgccggatccgccatc
aaccaggacggccgctccaacggactcctcgcgccgaaccccgacgcacaggccgacgca
ctgcgattcgcgtaccgcgacgccggcatcaacccgtcgggcgtggactacatcgaagcg
cacggcaccggaaccatcttgggcgatcccatcgaggccgacgcgctcggccgcgtggtc
ggtcgtggccgcgacgcggacaagccggcactgctcggctcggcgaagaccaacttcgga
cacctcgaatctgccgcaggcgcagcaggtttgatcaaggtcgtgctggcgatgcaggag
aacaaactcccagcgtcactgaactacgtgggccccaacccgtacatcgacttcgacaaa
gcacacctgaaggtcatcccggaggccaccgactggccgcggtacaccggcaaggccgtc
gccggcatctccggtttcggcttcggcggcaccaacgcccacgtcgtcgtgcgcgagtac
gtaccgggtgagacctcggccgaattcgaccccgctgccgtggatcccgaggccgcggtg
gtggagggcgtctacgaggagcagctcgacgccgagacgaccagcccggtcgccgaggcc
gagaccatcctggcggagtccgacagtgctccggagacagtgattctcgcggtgtcggcc
gcgttgccgtcgcgtcgtaaacgcgcggcgtcggaactggccgactggctcgagaccgaa
gagggcagcacgacgcctctcgtcgatgtcggccgcacgttggctcggcgtaaccacggg
cgttcgcgcgcagtggttctcgcgaccaccacggccgaggccatcgccggattgcgcgcc
atcgcggcaggcaagcccggaccgggcgtgttctccgcggactcgcctgcgtccaacggc
gcagtgtgggtgttctccggattcggctcgcagcaccgcaagatggcatcgcggctgtac
cgaaccaacgccgtgttcgccgccgaggtggacaaggtggacgagctgctcgtcgacgaa
gccggctactccatccgcgagatcatcctcgacgactcgcagacctacgagttcgagaac
tctcaggtcgccatcttcgtaatccagatcgctttggccgcaacgcttcgcgcgcacggt
gccgagccgtcggccgtcatcggccactcgatgggtgaggtcgccgccgcgtacgttgcc
ggaggcctgaacctcgaagacgccgtccgcatcatctacgcccgctcgcggctgctggcc
gagggccaggacggcctcggtgccgcctcgcagggtgccatggcactcgtcgagtacacc
cccgacgaggtcaagaccctcaccgatcagttcccgaacgtggagccctgcgtgtacgcc
gcgcccacgcacaccacggtcggcgggccccgcgccgaggtcgaagccctcgtcgaaaag
gccgaggccgcaggcaaaatggcccgactgctcgacgtcaagggagccggccacaccgca
gcagtcgacgttctgctcggtgagctcgccgccgagctcgccggaatcgaaccgagcaag
ctcaccgcgggggtctactcttcggtcgatcgtgaggcgcactaccgcgtcggacatgcg
gcgattcacggcgtcgactactggaccaagggaatgcgtcacccggtctggttcacccag
gccgtcaatgttgctgtgggagacgggcacacgacgttcgtggagctcgccccgaacccc
gtcgcgctgatgtcggttgccgctaccgcgtgggctgccggcctggccgacgccactttg
attccgacgctcaagcgcaaggaagacgaggccgacacgttcctctccgcgctggcgcag
ctgtacgtgcacggtcatgcgctggaactggcgacgctgttcgagtcgggtccgtatgcc
gcaattccgcgaactgcgtacttgcgcaaggagttctggctcaactcgcaggtcagctcc
agcggtaactctcgcgttcccggtgcccgggtggcactgcccgacggccgccacgtctgg
gaagttcaggcctcggccgtctcgggattcgatgcgttggtcaccgccgctgcctcgcag
gtgttctccgatgtggctttgggtgcttcggtctcgcatgcatcggtgcccgcggccggc
acggtcgtcaccacgttgacctcacacctcggtggtgcgtcggtccaggtccatgcacac
gaaggttcggcgttcaccctgctgcacgaggctgtcgtcatttcgggtgatgctcgtccg
gaacccgttgtggcggtagaagagcgatcctcgtcgccgatggaagagttgcccgaggtc
gtcgagacgttcggtgaccgctgggatcccaacggcaatcagaagctcgaagatcggttg
gcgatcatcgtcgccgagtcgatgggctacgcacccgaggacttgcctcccgaggtgccg
ctgatcgaactggggctggattcgctcagcgccgttcggatcaagaaccgcgtcgagtac
gaattcgacattcccacagtgcaattgcaggccgtgcgtgatgcgaacctgcgtgaggtg
gagaagtacctgcgctacgcgatcgagaaccgcgacgaggtgcaggcgctggcagacaag
caggccgccgaaaaggctgcagagcaggctgccgagagtggcgcgactgcacgcgacgca
gtcctggagacggccgtcgccgcaccggagaccgcggtgccgagtgcggaataccaaccc
gcacctgtggtcgcagcgcagaccgacctgggcggcaaggaagcgttcgccgaggccgcc
ggatccgatgtgcccccacgtgacaacgccgagcggatgacgttcgcaacgtgggcagtg
gtgacgaaggaatcggccaagggcatcttcaacaccctgccgatcctcgacgacgagacg
gccgagaagttggccgctcgcctgaccgagcgggcaggcggcgagatcaccttcgacgac
gtactggactcggagaccatcgagcagctcgccgacaaggtacgcccgcatctcgaggac
ggcgagatcgacggtgtcgtgcgcaatcttcgggcccgtcccgagggctccacggccaca
ccggtattcgcattccactcggccggtagctccaccgtcgcctacgagccgttgctgcgg
aagttgccggcaggcacgcccatgtacggcctcgagcgcgtcgaaggacccatcgccaag
cgcgctgcggagtacgtgccgttgatcaaggcgatccagcccgagggaccgtacgtgttc
gtcggatggtcgctcggcggcatcctcgcctacgaggtggcgcgtcagatggaagaggaa
ggcatcgaggtcgcctacgtggggctgctcgataccgtcatgcccggcaccaagatcccc
gacaccaaggacgaagtccgcaagcgttgggagcggtacgccgcgttcgccaagaagacg
tacaacgtcgactacccgatcccgtacgacaagttggtcgactccgacgacgagggtcag
attcggatcatcaccgatctggtcaagctcagtggggccaagattcccggcggcatcatc
gagcatcagcggacgtcgtggctcgacaatcgggctatccagacggccgagctcaaggag
tacggcgggcacgtcacgctgtacctcgccgacaagtaccacgacgacgcgatcgccctc
gagcccgcatacgccacccgcgaagagcacggtggttggggaccggtggtcaaggacctc
gagatcgtctacgtcggaggcgaccacctcgcggtcgtcgacgagccgtacattggaaaa
attgcggcccatctgtcgaagacgctcgagaacatcgagtctgcaagaaccggagcgtag
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