Rhodococcoides fascians D188: A3L23_02331
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Entry
A3L23_02331 CDS
T04328
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa03030
DNA replication
rfa03430
Mismatch repair
rfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3L23_02331 (dnaX_1)
03430 Mismatch repair
A3L23_02331 (dnaX_1)
03440 Homologous recombination
A3L23_02331 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfa03032
]
A3L23_02331 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_02331 (dnaX_1)
Enzymes [BR:
rfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3L23_02331 (dnaX_1)
DNA replication proteins [BR:
rfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3L23_02331 (dnaX_1)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3L23_02331 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_16
Mg_chelatase
AAA_19
AAA_14
AAA_30
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AMY53671
LinkDB
All DBs
Position
2421976..2424498
Genome browser
AA seq
840 aa
AA seq
DB search
MHDATEPWVPSRTPTRDATEPMVPPRTPTRDATVSSVAGTLSGVALYRKYRPATFAEVVG
QEHVTEPISVALDSNRINHAYLFSGPRGCGKTSSARILARSLNCAEGPTSTPCGVCNSCV
ALAPGGPGNFDVVEMDAASHGGVDDARDLRDKAVYAPAESRYVIFIIDEAHMVTPAGFNA
LLKVVEEPPEHLVFIFATTEPEKVLPTIRSRTHHYPFRLLAPSTMRGLLEKICGQEQVPV
EDAVYPLVIRAGGGSPRDSLSVMDQLLAGAGPEGVTYPRALSLLGVTDVALIDEAVDALA
AGDGGALFGTVDKVMDAGHDPRRFAIDLLDRMRDLILMKAVPDAGERGLVDVPGDVLERL
RDEADLLGSATLTRYAEIVHSGLGEMRGATAPRLLLEVMCARMLLPSASDAESAVLQRLE
RVERRLDVTLPAGEQAAVAQAAADPTRPQLPATDEPAPSGPPPVNKFQRPSQRQPAAEAA
PAPAPTPAPTPAPAPVAAPEPMAVPEPSPVPEPAAPEPAPTPEPAPTPEPAPAPTPTPEP
AAPEPAPAPEPAPTPEPAPTPEPAPTPEPAPTPEPAPIPEPAPTPEPAPVTTSVAAQQHS
EPSLSHEDFPPEPEDEYGPEPEPVYESEPEPVAAPAAASNEPDAAAVRAVWSEVRTKVRE
RSRTVEVMLSGASVRTVENGTITLGHDSAPLAKRLEEPRNADVIRDALRDVFGVEWSVVC
LVGAAAPPEPSSAKKDEPAAKPASLPKFSRPSQAGAPRPTSDGFGSAGDGSDADIPMPEA
PDYPDDPEPVGPPPPETPEDEEELLKAAAEPADPSVRRDPETVAMELLVSELGAVPLKEI
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgcaaccgagccgtgggttccatcgcgcacaccgacgcgcgatgcaactgag
ccaatggttccaccgcgcacaccgacgcgcgatgcaactgtgtcgtcggtcgccggtacc
ctttcgggcgtggccctctaccggaagtaccgtcccgcgacgttcgccgaagtcgtcggt
caggagcacgtcaccgaaccgatcagcgtggcgctcgattccaacagaatcaaccacgcc
tatctcttctcaggccctcgtggctgcggaaagacgtcctcggcgcgcatcctcgcccga
tcgctgaactgtgccgaaggaccgacctccaccccctgcggtgtgtgcaactcctgcgtc
gcactggcaccgggcgggcccggcaacttcgacgtcgtcgagatggacgcagccagccac
ggtggcgtcgacgatgcccgcgaccttcgagacaaagccgtgtacgccccggccgagtcg
cgctacgtcatcttcatcatcgacgaggcgcacatggtcaccccggccggcttcaacgcg
ctgctcaaggtcgtcgaggaaccgccggagcacctggtcttcatcttcgcgaccaccgag
cccgagaaggtgctccccaccatccgctcgcgaacccaccactacccgttccgactgctc
gcgccgtcgacgatgcgcggcctgctcgagaagatctgtggtcaggaacaggtcccggtc
gaggacgcggtctatccactcgtcatccgcgcgggtggcggttctccgcgtgactcgctg
tcggtcatggaccagttgcttgccggagccggaccggaaggcgtcacctacccgcgagct
ctgtcgctgctcggcgtcaccgacgtcgcgctgatcgacgaggccgtcgacgcactggcc
gcgggagacggcggcgcactgttcggcaccgtcgacaaggtgatggacgcgggccacgac
ccacgtcgctttgccatcgaccttctcgaccgcatgcgagacctgatcctgatgaaggcc
gtacccgacgccggtgaacgtggcctggtcgacgtgccgggcgacgtcctcgaacggctc
cgcgacgaggcggacctgctcggctcggcgacgctgactcgctacgccgaaatcgtgcac
tcgggcctcggcgaaatgcgaggggccaccgcgccgcgtctgctgctcgaagtgatgtgc
gcacggatgctgctgccctcggcttccgatgcggaatcggcggtgctgcagaggctcgaa
cgcgtcgaacgtcgcctggacgtcacgctccctgccggtgagcaggcggcagtggcacag
gcagccgcagacccgacacgaccacagctgcccgcgaccgacgagcctgcgccctccggc
ccgcccccggtgaacaaattccagcgaccgtcccagcgacagccggccgccgaggccgcc
cccgctccggcgccaacccccgctccgacaccagcgcctgcgcctgtcgcggcacccgaa
cccatggcggtcccggaaccgtctccggtgcccgagcctgcagcacccgaacccgctccc
acacccgagcccgctcccacacccgagcccgctcccgctcccactcccacacccgagccc
gcagcccccgaaccggctcccgcacccgaaccggctcccacacccgaaccggctccgaca
cccgagccagctccgacacctgaaccggctccgacacccgagccagctccgatacccgaa
ccggctccgacccccgaaccggcaccggtcacgacttccgttgcagcgcaacagcattcg
gaaccttcgctgtcccatgaggattttccgccggagcccgaggacgagtacggcccggag
cccgagccggtgtacgaatccgagcccgagcctgtcgcggcacccgcggctgcctccaac
gagcctgatgcggcagccgtccgcgcggtgtggtccgaggtgcgaaccaaggtacgagag
cgaagcaggaccgtcgaggtgatgttgtccggtgcgtcggtacgcaccgtcgagaacggc
accatcactctgggccacgattcggcaccgctggcgaagcgtctcgaagaaccccgcaac
gccgacgtcattcgggacgcgttgcgtgacgtgttcggcgtcgaatggtcggtggtctgt
ctggtgggtgctgcggcaccaccggaaccgtcatcagcaaaaaaagatgaaccggcagcg
aaacccgcgtcgctgccgaagttctcgaggccgagccaggcaggggctccccgtccgacg
tcggacggtttcggttcagcgggcgatggatcggacgcagatattccgatgcccgaggcc
ccggactatcccgatgatcccgagccggtaggtccgccgcctccggagacgccggaggac
gaggaagaactgctcaaggccgcggccgaacccgcggacccgtcggttcgtcgggacccg
gaaacggtcgccatggaactgctggtgagcgaactcggagcggtaccgctcaaggagatc
tga
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