Rhodococcoides fascians D188: A3L23_02392
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Entry
A3L23_02392 CDS
T04328
Symbol
crp
Name
(GenBank) cAMP receptor protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa02020
Two-component system
rfa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3L23_02392 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3L23_02392 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfa03000
]
A3L23_02392 (crp)
Transcription factors [BR:
rfa03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
A3L23_02392 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
wHTH-PRTase_assc
HTH_23
HTH_29
HTH_24
HTH_ParB
HTH_3
HTH_IclR
DUF134
DUF977
Motif
Other DBs
NCBI-ProteinID:
AMY53730
LinkDB
All DBs
Position
complement(2487127..2487801)
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AA seq
224 aa
AA seq
DB search
MDDVLARAGIFQGVEPSAVAALTKQLQPVDFPRGHVVFNEGEPGDRLYIIVSGKIKLGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTVTEVRAVSMDRAALKDWIDQRPEIA
EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKALLQLAQRFGTQEAGSLRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgtcctggcacgggccggcatcttccaaggagtcgaaccctctgcggttgcg
gcactgacgaagcagctgcagcctgtcgatttcccccggggacacgtggtgttcaacgag
ggtgagcccggagaccggctctacatcatcgtttccggcaagatcaagctcgggcgacgc
tcccccgacggccgcgagaacctgctgacgatcatgggaccgtcggacatgttcggcgag
ctctccatcttcgaccccggccctcgcacgtcctcggccaccacggtcaccgaggtgcgc
gcggtcagcatggaccgcgcggctctcaaagactggatcgatcagcgccccgagatcgcc
gagcagctgctgcgcgtgctggctcgccggttgcgtcgcaccaacaacaacctggccgac
ctcatcttcaccgacgtccccggacgcgtggccaaggcgctgctgcagcttgcccagcgc
ttcggcacccaggaagcgggatcgctgcgcgtcacccacgacctgacgcaggaagagatc
gctcagctcgtcggagcgtcgcgcgagaccgtcaacaaggcactggccgacttcgcgcac
cgcggatggctacgcctcgagggtaagtccgtactgatctcggactccgagcgcctggcc
cgccgagctcgctag
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