KEGG   Rhodococcoides fascians D188: A3L23_02724
Entry
A3L23_02724       CDS       T04328                                 
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rfa  Rhodococcoides fascians D188
Pathway
rfa00010  Glycolysis / Gluconeogenesis
rfa00020  Citrate cycle (TCA cycle)
rfa00260  Glycine, serine and threonine metabolism
rfa00280  Valine, leucine and isoleucine degradation
rfa00310  Lysine degradation
rfa00380  Tryptophan metabolism
rfa00620  Pyruvate metabolism
rfa00630  Glyoxylate and dicarboxylate metabolism
rfa00640  Propanoate metabolism
rfa00670  One carbon pool by folate
rfa00785  Lipoic acid metabolism
rfa01100  Metabolic pathways
rfa01110  Biosynthesis of secondary metabolites
rfa01120  Microbial metabolism in diverse environments
rfa01200  Carbon metabolism
rfa01210  2-Oxocarboxylic acid metabolism
rfa01240  Biosynthesis of cofactors
Module
rfa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rfa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rfa_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    A3L23_02724 (lpdC)
   00020 Citrate cycle (TCA cycle)
    A3L23_02724 (lpdC)
   00620 Pyruvate metabolism
    A3L23_02724 (lpdC)
   00630 Glyoxylate and dicarboxylate metabolism
    A3L23_02724 (lpdC)
   00640 Propanoate metabolism
    A3L23_02724 (lpdC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    A3L23_02724 (lpdC)
   00280 Valine, leucine and isoleucine degradation
    A3L23_02724 (lpdC)
   00310 Lysine degradation
    A3L23_02724 (lpdC)
   00380 Tryptophan metabolism
    A3L23_02724 (lpdC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    A3L23_02724 (lpdC)
   00670 One carbon pool by folate
    A3L23_02724 (lpdC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rfa04147]
    A3L23_02724 (lpdC)
Enzymes [BR:rfa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     A3L23_02724 (lpdC)
Exosome [BR:rfa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   A3L23_02724 (lpdC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 FAD_oxidored NAD_binding_8 GIDA HI0933_like DAO FAD_binding_2 Thi4 3HCDH_N Lys_Orn_oxgnase AlaDh_PNT_C ApbA 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AMY54061
LinkDB
Position
2813420..2814835
AA seq 471 aa
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEKKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKLFGISGEASFDFGAAFDRSRKVADGRVKGIHFLMKKNKIPEYDGQGTFTDAN
TIEVELSKGGTETITFDNAIIATGSTTKLLPGTELSKNVVTYEEQIMTKDLPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDKDVSKEIEKQYKKLGVKVITGAGVQSID
DDGSKVTVEIKHNKSGESETFTVDKVMQSVGFAPRVEGFGLEKTGVELTDRGAIGITNTM
QTNVPHIYAIGDVTAKLQLAHVAEAQAVVAAETIGGAETLPIDDYRMMPRATFCQPQVAS
FGLTEDQAREEAQARGSDIKVANFPFAANGKAHGLGDATGFVKLIADTEHGELLGGHLIG
PDVSELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq 1416 nt   +upstreamnt  +downstreamnt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacaactcggactcagcactgccatcatcgagaagaagtactggggcggt
gtgtgcctcaacgtgggctgcatcccctcgaaggcgcttctccgtaacgccgagctggcg
cacctcttcaccaaagaggccaagctgttcggtatctcgggtgaagcatccttcgacttc
ggcgcagcattcgaccgcagccgcaaggtcgcggacggacgcgtcaagggcatccacttc
ttgatgaagaagaacaagatccccgagtacgacggccagggcacgttcaccgatgccaac
accatcgaggtcgaactgtccaagggcggcaccgagacgatcacgttcgacaacgcgatc
atcgcgaccggcagcaccaccaagctgctcccgggaaccgagctcagcaagaacgtcgtc
acgtacgaagagcagatcatgaccaaggatctgccgggctcgatcctcatcgtcggcgcg
ggcgccatcggtatggaattcgggtacgtcctgaagaactacggagtcgacgtcaccatc
gtcgagttcctcgatcgcgcgctccccaacgaggacaaggacgtctcgaaggaaatcgag
aagcagtacaagaagctcggcgtcaaggtcatcaccggcgcaggtgtgcagagcatcgac
gacgacggctccaaggtcaccgtcgagatcaagcacaacaagtccggtgagagcgagacc
ttcaccgtcgacaaggtgatgcagtccgtcggattcgcccctcgcgtcgagggcttcggt
ctcgagaagaccggtgtcgagctcaccgatcgcggtgccatcggcatcacgaacacgatg
cagaccaacgtcccgcacatctacgccatcggcgacgtcaccgccaagctccagctcgcc
cacgtggcggaggcgcaggccgtggtggctgccgaaaccatcggcggcgcagagacattg
ccgatcgacgactaccgcatgatgccgcgcgccacgttctgccagccgcaggtcgcgagc
ttcggtctcaccgaggaccaggcccgcgaagaagcgcaggctcgtggatccgacatcaag
gtcgcgaacttcccgttcgccgccaacggcaaggcacacggcctcggcgacgcgacgggc
ttcgtcaagctcatcgccgacaccgagcacggtgagctgctcggtggccacctcatcgga
ccggacgtctcggagctgctgccggagctgaccctggcccagaagtgggacctgacggtc
aacgagctggcccgcaacgtccacacgcacccgacgctgtcggaggcactgcaggaagcg
atccacggcctcgcaggccacatgatcaacttctga

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