Rhodococcoides fascians D188: A3L23_02965
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Entry
A3L23_02965 CDS
T04328
Symbol
ripA_1
Name
(GenBank) Peptidoglycan endopeptidase RipA
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfa01002
]
A3L23_02965 (ripA_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfa01011
]
A3L23_02965 (ripA_1)
Peptidases and inhibitors [BR:
rfa01002
]
Cysteine peptidases
Family C40
A3L23_02965 (ripA_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
rfa01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
A3L23_02965 (ripA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
SLT_2
SLT
PRKCH_uORF2
Motif
Other DBs
NCBI-ProteinID:
AMY54298
LinkDB
All DBs
Position
complement(3046560..3048053)
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AA seq
497 aa
AA seq
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MAGDPFAVIVAVIVSAAGAVAGTDAPAPLQNQAVKDQAAAVAAAAEDQGKTMSDQWADLM
GTMPEPAADVADRTLNDAAEGLHTAVEPMLPEMPTVAEIETPEAPTAVTPTAASPAVGMA
AGLTPAAITPSAPLPFSVFSSNAASSAVAGLATGALQFAGRTYTAADIATQTAFMASAEA
IRRALFPGLPITFTGINVGPIGLGAVGAITAFVPWLQKAGNICGGVKATTIAALYAAENG
FRYGPTAPVSSTGAQGPGQFMPGTWATYGKDYDGNGVVDVNSIGDSVMASGTMLCDIYGQ
VDGWKRDGKVSGDTTDLTLAGYNAGAGAVLRSGGMPSGSVDYETQTKPYVARIRATEAQF
AAILTPFAGLDLTGMGGRAVQLAMDYLGLPYVWGGGNINGPSGGGFDCSGLTSYALFKAS
GGKVTLPRTSETQWNVGTEVPMALAQPGDLLFGNWGAAGPGHVAIYMGNGQMVHAPTTGD
VVRVAPVFDGMRARHIL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgatcccttcgcagtcatcgttgccgtcatcgtgtctgccgcaggcgcagtc
gccggaacggacgccccagctccactgcagaatcaggcggtgaaggatcaggcagccgcg
gtcgctgccgctgccgaggaccagggcaaaacgatgtccgaccaatgggcagacctgatg
ggcaccatgcccgaacccgccgctgacgtcgcagaccggaccctgaacgacgccgccgag
ggactgcacaccgccgtcgaaccgatgcttccggaaatgcccacggttgccgagatcgag
acgccggaagcgcccacagcagtgacgcccacagcagcctcgcccgcagtgggaatggct
gcgggtctcacaccggcggcgatcacgccgagcgccccgctacccttcagtgttttttcg
tcgaatgcggcatccagcgccgtcgccgggctcgccaccggcgctctgcaattcgccggc
cggacgtataccgccgccgacatcgcgacccagacggcgttcatggcgtcggccgaggcc
attcggcgagcactgttccccggtctacccatcacgttcaccggcatcaatgtgggtccg
atcggtttgggcgcggtgggagcgatcaccgcgttcgtgccgtggttgcagaaggcgggc
aacatctgcggcggcgtcaaggccacaacgatcgccgcgctctatgccgcagagaacgga
tttcgatacggtccgacagctccggtatcgagcaccggcgcacagggacccggccagttc
atgccgggaacgtgggcaacctacggcaaggactacgacggcaacggcgtggtcgacgtc
aacagcatcggcgactcggtcatggcgtcgggaacgatgctgtgcgacatctacggacag
gtcgacggctggaagcgcgacggcaaggtctcgggcgacacgacggacctgaccctcgcc
ggatacaacgccggagcgggcgcagtgttgcgctcgggcggaatgccctcggggtcagtc
gattacgagactcagaccaagccctacgtagcgcgcatccgggccaccgaggcccagttc
gcggccatcctcactccgttcgccgggctcgatctcaccggaatgggcgggcgggcagtg
caattggcgatggattacctgggcctgccgtacgtgtggggcggcggaaacatcaacgga
ccgtccggcggcggattcgactgctcgggcctgacgtcctacgcactgttcaaggcctcg
ggcggaaaggtcaccctgccgcgtacgtcggagacgcagtggaacgtgggcaccgaggtg
ccgatggccctcgcccagccgggcgatctactgttcggcaactggggcgcggcgggcccg
ggacatgtggcgatctacatgggcaacgggcagatggtgcatgcgcccaccaccggtgac
gtggtgcgggtggcaccggtgttcgacgggatgcgagctcgccacatcctctga
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