Rhodococcoides fascians D188: A3L23_03267
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Entry
A3L23_03267 CDS
T04328
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00300
Lysine biosynthesis
rfa00470
D-Amino acid metabolism
rfa01100
Metabolic pathways
rfa01110
Biosynthesis of secondary metabolites
rfa01120
Microbial metabolism in diverse environments
rfa01230
Biosynthesis of amino acids
Module
rfa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A3L23_03267 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A3L23_03267 (lysA)
Enzymes [BR:
rfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A3L23_03267 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PRC
Motif
Other DBs
NCBI-ProteinID:
AMY54595
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Position
3369562..3370983
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AA seq
473 aa
AA seq
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MSAHPAGPKHADAPAKQSMSERPSAASDMTTLPEQVWPRNAARGDDGTVRLAGVSVTDLA
AQYGTPLFVVDEDDFRARCREMAAAFGAPERVHYASKAFLCGEIARWVADEGLSLDICSG
GELAIALAAGFPADRIAMHGNNKSVAELEAGVSAGVEHVVLDSNIEIDRLDAVAGSAGVV
QDVLIRITVGVEAHTHEFIATAHEDQKFGFSLADGSAIEAVRRVFAADNLRLVGLHSHIG
SQIFEVDGFELAAHKVIGLLRDIVAEFGVDKTSQISTLDLGGGMGISYVPSDDPPPVDQL
AAKLASIVETESAAAGLPVPTIAVEPGRAIAGPGTVTVYEVGTVKDVTVDNATRRRYISV
DGGMSDNIRTSLYQAEYDCRLVSRTSDADAVMARVVGKHCESGDIVIKNTWMPADVGPGD
LLAVAATGAYCYSMSSRYNLLTRPAVVAVKDGRARLILRRETIEDLLSLEVQP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcacatccggcagggcccaagcacgccgatgccccagccaagcagtcgatgtcc
gagcgtccgagcgccgcgtcggacatgacgacgcttcccgaacaggtgtggccacgcaac
gcggcacgcggcgacgacggcacggttcggctcgcgggggtgtcggtcaccgacctcgcg
gcgcagtacggcaccccactgttcgtcgtggacgaggacgacttccgcgcacgctgccgc
gagatggccgctgcgttcggggcacccgaacgagttcactacgcctccaaggcatttctg
tgtggcgagatcgctcgttgggtggccgacgagggtctctcgctcgacatctgctcgggc
ggtgagctggccatcgccctggctgccggattcccggcggatcgaattgcgatgcacggc
aacaacaaatccgtggccgagctcgaggccggagtgagtgccggagtcgagcacgtcgtt
ctcgactccaatatcgagatcgaccgtctcgacgccgtggccggttcggccggtgtggtg
caggacgtgctgattcgtatcaccgtcggcgtcgaggcacacacgcacgagttcatcgcg
accgcccacgaggatcagaagttcggcttctcgctcgccgacggctcggcgatcgaagcc
gtccgtcgggtgttcgccgcagacaaccttcgtctcgtggggctgcacagtcacatcggc
tcgcagatcttcgaggtcgacggtttcgagctggccgcgcacaaggtcatcgggctgctg
cgcgacatcgttgccgagttcggcgtggacaagacctcgcagatctcgacgctcgatctc
ggtggcggcatgggtatttcgtacgtaccgagtgacgatccgccgcccgtcgaccaattg
gcggccaagctggcgagcatcgtcgagacggagtcggccgcggccggtttgccggttccg
accattgccgtcgagccgggtcgagccatcgccgggccgggcaccgtgacggtctacgag
gtgggcaccgtcaaggacgtcaccgtcgacaacgccacccgcaggcggtacatcagtgtc
gacggcggcatgagcgacaacattcgtacgtcgctgtatcaggccgagtacgactgccgc
ttggtctcgcgtaccagcgacgccgacgccgtgatggctcgcgtggtcggaaagcactgt
gagagtggcgatatcgtcatcaagaacacgtggatgccggccgacgtcgggcccggtgat
ctgctcgccgtcgcagccaccggcgcttactgctactccatgtccagccgctacaacctg
ctgacgcggcccgctgtggtcgcggtcaaggacgggcgtgcgcgcctgatcctgcggcgg
gaaaccatcgaagatctgctcagcttggaggttcagccatga
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