KEGG   Rhodococcoides fascians D188: A3L23_03425
Entry
A3L23_03425       CDS       T04328                                 
Symbol
rhpA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase RhpA
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rfa  Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfa03400]
    A3L23_03425 (rhpA)
Enzymes [BR:rfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3L23_03425 (rhpA)
    5.6.2.6  RNA 3'-5' helicase
     A3L23_03425 (rhpA)
DNA repair and recombination proteins [BR:rfa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    A3L23_03425 (rhpA)
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: AMY54750
LinkDB
Position
3552288..3554357
AA seq 689 aa
MTAPIGLDAAIEYHVVNSLGWPGLRPLQTAAVLPVRSGTDCVLVAPTAGGKTEAAVFPLL
SEMVDGNWSGTSILYVTPLRALLNNLHPRLIAYGAWIGRSVGLWHGDVGQSERRRMLADR
PDILLTTPESLEAMLVSRRVDQERFLGSVRAVVIDELHAFAASDRGWHLLAVLERVERIA
GRTIQRVGLSATVGNPETVGLWMQGSTDGRQPVAVVREDSKSAMEPEVTLDYVGSMENAA
TVISRLHRGEKRLVFAESRRSAEELAFLLRERDVQTYVSHSSLSADERRMSEQAFAEAKD
TVIVATSTLELGIDIGDLDRVIQIDAPRTVSSFLQRLGRTGRRPGTSRNTLFLSTSLDGL
LDASAVLLLWKRGFVEDVVAPPHPRHLAAQQLLALALQEGAFGASDWSRWWGDLPLMADG
QEVLDFLCEREFLVEDSGLLMIGPRAEKEFGKRHFMDLLSTFVADLELRVVAGVKEVGFI
SPLAIPAPADRSQRPLVLAGRGWLIKHVDWEHFTVWVEEVPTKGDVKWPSSAVAQSFDIC
QAKREVLLGAVPPVTLSKRVPDALGGLRTERAAEVNADGIVLQGRAAGGTRVWTWAGLKA
NATLLGGLNLVARGTENESVLLPDGISGTDIRGADPDAVPRIDEEAITGLKFSVALPVEL
AARTLGERLADPRGARATANSAVVRYGDR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgaccgctccaataggtcttgacgcggccatcgaatatcacgtcgtcaactcgttgggc
tggcccgggttgcgaccactacagaccgcggcggttctgccggtacggtccgggaccgac
tgtgtacttgtcgcacccacggccggaggcaagaccgaagcagccgttttcccactgttg
tcggagatggtcgacggcaattggtcggggacgtcgatcctctacgtcacaccgcttcgt
gcactcttgaacaacctccatccccggttgatcgcctacggcgcatggatcggccgcagc
gtcgggctgtggcacggggacgtgggccagtccgaacgtcgccgaatgctcgccgaccgg
cccgatatcctcttgaccaccccagaatctctcgaagccatgctcgtgtcgcgtcgggtc
gaccaagagcgattccttgggtcggtgcgagccgttgtgattgatgagctccatgcgttc
gccgcctctgatcggggctggcacctccttgcggtattggagcgggtggagcggatagcg
ggtcgcacgatccaacgggttggattgtcagccaccgtgggaaaccccgagaccgtcggt
ctctggatgcaagggtcgactgatggtcgtcagccggttgccgtggtgcgcgaggactcg
aagtccgcaatggaacctgaggtcacccttgattacgtcggtagtatggagaatgcggcg
acggtgatctcgcgactgcatcgcggcgagaagcggttggtcttcgcggagtcgcgtcgt
tctgctgaggaacttgcgtttcttctccgcgagcgcgacgttcagacgtacgtgtcccac
tcgtcactgtcagctgacgagagacggatgagcgagcaagctttcgcggaagccaaggac
accgtcatcgtggcgacctcgacgctggagctcggtatcgatatcggcgacctcgaccgc
gtaatccagatcgatgccccgcgcactgtgtcgtcgttcttgcagcgactcggccgaact
ggaaggcgtcctgggacaagtcgaaacaccctgttcctgtcgaccagtctcgacggtttg
ctcgacgcttccgcggtgctgctgctgtggaaacgaggattcgtcgaagacgttgtcgct
ccgccccatccacgtcacctggctgctcagcaactcctcgcgttggctttgcaagaaggt
gcgttcggcgcatccgattggtcgaggtggtggggggacctgcctctgatggcggatggc
caggaggtgctcgatttcctatgtgaacgcgaattcttggtcgaggattctgggttgctg
atgatcggtccacgcgctgagaaggagttcgggaagcggcacttcatggaccttctttcg
acattcgtggcggatctggagctgcgggttgtcgcgggggtcaaggaggtcgggtttatt
tcgccgctcgctatccctgccccagcagaccgtagtcaacggccgctcgtccttgctggt
cgcggctggctcataaaacatgtcgactgggagcacttcacggtgtgggtcgaggaagtc
ccgacgaagggcgacgtgaagtggccatccagcgcggtcgcgcaatcgttcgacatttgt
caagcgaagcgtgaggttttgctgggcgcggtcccccccgttacattgtcgaaacgtgtc
ccggatgccttggggggtcttcgcacagaacgcgctgcggaagtcaacgcggacggcatc
gttctgcaaggtcgtgcagccggaggaacgcgggtttggacatgggcaggattgaaggca
aacgcgacgctgctagggggactcaacctcgttgcacgtgggacggagaatgagagcgtt
ctcctccctgatggcatatcgggaacagacatcagaggagctgatcccgacgcagtcccg
agaatcgacgaagaagcaattaccggactcaagttttcggttgcactgccggttgaactc
gccgcaagaacactgggtgagcgactcgctgatccgcgcggggccagggcaactgccaat
tccgctgtcgtccgatacggagaccggtga

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