Rhodococcoides fascians D188: A3L23_03496
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Entry
A3L23_03496 CDS
T04328
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa03030
DNA replication
rfa03430
Mismatch repair
rfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3L23_03496 (dnaQ)
03430 Mismatch repair
A3L23_03496 (dnaQ)
03440 Homologous recombination
A3L23_03496 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfa03032
]
A3L23_03496 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_03496 (dnaQ)
Enzymes [BR:
rfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3L23_03496 (dnaQ)
DNA replication proteins [BR:
rfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3L23_03496 (dnaQ)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3L23_03496 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AMY54821
LinkDB
All DBs
Position
3641842..3643587
Genome browser
AA seq
581 aa
AA seq
DB search
MKNSVRTGSDKWVVVDVETSGLKASRDRVLSVAALTVDEDGRVGRELSTLVNPGCDPGPV
HIHKLTPERLAGAPTFDMIAPQLMDLLDGRTLVAHNASFDHGFLKLESMRAGIDMPTKQR
LCTVALSRRLQLDTPNHKLSTLAAHWKVLQSNAHDAYDDAQVLAQVFTHSARLARSLELP
LPVVTCTERLTLYPDTVPRTHCAWENPGPLAEDGGLVQGMRVVISGDTRIPRLRLAAQLT
EAGLDVMNSVSRFTSVVVCSDPTTESGKVERARAHGLRIISESELLDLLRNVQPGTPKGI
RPRTQPKPAEQQPDPVVKPWQTRRVLVMGGSHAESVLMRSRLIQLGATPAVNLSAGVTDI
LILDGGDGDPRMPKVKERDLTLLTPAAIDRELNIEVPAPLPARPSRIAPLVPRGGVVDLD
PDQAVLTVNSSWRADDSDRVGVDVVAFLLSDDELVASDEDFVFYNAPVTSDGAVSMSIDG
DSEQGVRIDLSLVPEDCVRITVAAAIDGDHTFGDLGAVSVSLDGLDSAVATAVLDAATTE
RSMLLAEIYRRGSGWRFRPIGQGYDDGLAELAVRFGVEVDG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaattcggttagaaccggcagcgacaaatgggtcgtcgtcgatgtcgagacctcg
ggtctgaaggcatcccgtgatcgagtgctcagtgtggccgctctgacggtcgacgaggac
ggacgtgtcggacgcgaactgtcgactctggtcaacccgggttgcgatcctggcccggtg
cacattcacaaactgacgcccgaacggcttgccggtgcgccgacgttcgacatgatcgct
ccgcaactcatggatctgctggatggtcgaaccttggtcgcgcacaacgcgagtttcgat
cacgggttcttgaagctcgaatcgatgcgtgcgggcatcgacatgccgacgaagcaacgg
ttgtgcaccgtggcattgtcgaggcgactacaactcgatactcccaaccacaagctgtcc
accctggccgcgcactggaaagtgctgcagtccaatgcgcacgacgcctacgacgatgcc
caagtgctggcgcaggtgttcacccacagcgctcggctggccaggtcgctcgaacttccc
cttccagtcgtcacgtgcaccgagcgtctgacgctgtatccggataccgttcctcgcaca
cattgcgcgtgggagaacccaggtccacttgccgaggacggcggtctcgttcagggcatg
cgagtcgtgatcagcggcgacacgcgaatcccgcgattgcgcttggccgctcagctcacg
gaagccggactggacgtgatgaattccgtcagtcgattcacgagtgtggtggtgtgttcg
gatcccacaacggaaagcggaaaagtcgaaagggcgcgcgcccatggccttcgcatcatc
tcggagtcggaattgctcgacttgctccggaatgtgcagccaggaacgccgaaaggtatt
cggccgcggacccagccgaaaccagccgagcagcagcccgatccagtcgtcaagccctgg
cagacaagaagggtcttggtcatgggcggttcgcacgccgagtcggtactcatgcggtcg
cgcctgatccaactcggtgcgacaccggctgtgaatctcagcgccggcgtgaccgacatc
ctgatcttggacggcggcgatggagacccgcggatgccgaaagtgaaggaacgggatctc
acgttgctgacaccggcagcgatcgaccgagaactgaatatcgaagttcccgcgccgctc
cctgctcggccgtcccgaatcgctccgttggtgccacggggtggcgtcgtcgacctcgac
cctgatcaggcagtgctgacggtcaacagttcctggcgtgccgacgactccgatcgggtc
ggtgtagatgtagtcgcgttcttgctgtccgacgatgaattggtcgccagtgacgaggat
ttcgtgttctacaacgctccggtcacctcggacggtgccgtctcgatgtcgatcgatggt
gacagcgaacagggtgtgcggatcgacctttcactcgttcccgaggattgcgtgcgtatc
accgtcgccgcagcaatcgacggtgaccacacattcggtgacctaggcgcggtatcggtg
tcgctcgatggactcgattcggcggtcgcgacagcggtgctggatgccgcgaccacggaa
cgatcgatgctgctcgcagagatctaccgccgcgggagtggctggcgcttccggccgatc
ggtcagggctacgacgacggattggcagaattggcggtgcggttcggcgtggaggtcgat
gggtag
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