Rhodococcoides fascians D188: A3L23_03607
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Entry
A3L23_03607 CDS
T04328
Symbol
phnF
Name
(GenBank) HTH-type transcriptional repressor PhnF
KO
K24968
GntR family transcriptional regulator, repressor of the phnDCE operon
Organism
rfa
Rhodococcoides fascians D188
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfa03000
]
A3L23_03607 (phnF)
Transcription factors [BR:
rfa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
A3L23_03607 (phnF)
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GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_11
Rrf2
DnaD_N
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMY54927
LinkDB
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Position
complement(3771566..3772279)
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AA seq
237 aa
AA seq
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MVMATEPRVLKHQIVRRSLDAMLDGMSAGDAFPSERDLADRYDVSRETLRQAMRELLVAG
RIERRGRATVVAEPKVVLPLAIGSYTEAAREKGMSATRILVGWDTFRADDALADLLGIDS
GTYVIQLERVFTTGDVRVGLETTRIPAHRIPGLSDSFDHRTSLYAELRTRGITFGRVVDT
IETVLPDAREAALLTVDTRTPMFLLGRVSYDTDGVPIEHRRSLYRGDRMTFTAVMDA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggttatggccaccgaaccccgcgtgctcaagcaccagatcgtgcgcagaagtctcgac
gcgatgctcgacggcatgtcggcaggagacgcatttccctccgagcgcgatctcgccgat
cgatacgacgtttcccgcgagaccctgcgtcaggccatgcgggaattgttggtcgcaggt
cggatcgaacgccgtggacgcgcgacagtagtcgccgagcccaaggtcgtattgccactt
gccatcggttcgtataccgaggcggcacgcgagaagggcatgagcgctacccgaatcctg
gtcggctgggacaccttccgagccgacgacgccctggcggatctgctgggaatcgacagc
ggtacgtacgtgattcagctcgagcgcgtcttcaccaccggagacgttcgagtgggcctc
gagacgacacgaatccccgcccaccgcattccgggtctatcggacagcttcgatcaccgc
acatctctgtatgccgaattacgaacgcgcggaatcacgttcggacgggtcgtcgatacc
atcgaaaccgtcctacccgacgccagagaagccgcgttgttgaccgtcgatactcggacg
ccgatgtttctgctcggccgtgtctcctacgacacggacggggttcccatcgagcaccga
cgttcgttgtaccgcggagaccgcatgaccttcaccgccgtcatggacgcctga
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