Rhodococcoides fascians D188: A3L23_03918
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Entry
A3L23_03918 CDS
T04328
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfa
Rhodococcoides fascians D188
Pathway
rfa00061
Fatty acid biosynthesis
rfa00071
Fatty acid degradation
rfa01100
Metabolic pathways
rfa01212
Fatty acid metabolism
rfa02024
Quorum sensing
rfa04146
Peroxisome
Module
rfa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A3L23_03918
00071 Fatty acid degradation
A3L23_03918
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A3L23_03918
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3L23_03918
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfa01004
]
A3L23_03918
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfa04147
]
A3L23_03918
Enzymes [BR:
rfa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A3L23_03918
Lipid biosynthesis proteins [BR:
rfa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A3L23_03918
Exosome [BR:
rfa04147
]
Exosomal proteins
Exosomal proteins of breast milk
A3L23_03918
Exosomal proteins of breast cancer cells
A3L23_03918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
AMY55231
LinkDB
All DBs
Position
complement(4094836..4096641)
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AA seq
601 aa
AA seq
DB search
MREFTVSAEYDIADTDSAVDSVFARARTSPDAVVFRRLDDGRWTDVGAAEFERLVVDVAR
GLVAAGIEQGDRVALMSSTRFEWSVIDYAIWAAGGVTVPIYETSSAGQVEWILEDAEPVL
LVLENDAHVRETEAVVAAAPSVRRTFVIDNASGTGAVQALIDNGADVSEDVVHERVSTLR
SSDPATLIYTSGTTGRPKGVQLTHANLLAESRGIRQTSLKALLTQGRSTLMFLPMAHVLA
RAVSIASFDAGVTLGHTNDIPNLVATFGTFRPDFILSVPRVFEKVFNTAKQKAHSDGKGK
IFDLATECAVAWSQAQDSGGPSIVLRAKHFVFDKLVYAKLRTALGGKCELAISGGAPLGA
RLGHFYRGIGVTIYEGYGLTETTAAFAVNTIGFQRVGSVGRPLPGNTVRIAGDGEIQLRG
PVVFDGYWRNEKATAESLDDGWFRTGDLGSVDEEGYITISGRKKELIVTAGGKNVSPAGL
EDHLRAGALISQAVVVGDQKPFIGALITLDPDAFDKWKSAHGKDSDATAADLQADPDLVA
EIDAAVADANKSVSHAESIKKYRLLPHDFSEESGELTPTMKLKRNVITKAYADEIEAIYA
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttcactgtttccgccgagtacgacatcgcggacaccgactcggctgtcgac
agcgtcttcgcccgcgctcggacgtcgccggatgccgtggtgttccgtcggctcgacgac
ggccgatggaccgatgtcggtgccgcagaattcgagcgactggtcgtcgacgtggccagg
ggcctcgtcgcggcaggtatcgagcagggcgatcgcgtcgcgctcatgtcgtccacgcga
ttcgagtggtcggtcatcgactacgcgatctgggccgcgggcggagtgaccgtgccgatc
tacgagacgtcgtcggcgggccaggtcgagtggattctcgaagacgccgagccggttctg
ttggtcctcgagaacgacgcgcacgtacgggagacagaagccgtcgtagctgcggcgccg
tcggtacgtcgaacgttcgtgatcgacaacgcttccggcacgggcgcagtgcaggctctg
atcgacaacggcgcggacgtctccgaagacgttgtgcacgaacgagtctcgacacttcgc
tcgtccgatccggccacgttgatctacacctcgggcactaccggccgccccaaaggtgtg
caattgacgcatgcgaacctccttgcggaatctcgcggcattcgccagacgtcgttgaaa
gctcttctgacacagggccgcagtacgttgatgttccttccgatggcgcacgtcctcgct
cgcgcggtgagtatcgcgtcgttcgatgccggagtcaccctcggccacaccaacgacatt
cccaacctggtcgcgaccttcgggacatttcgaccggacttcattctgtccgtgccgcgc
gtgttcgagaaggtcttcaacactgcgaagcagaaggcacacagcgacggcaagggcaag
atcttcgatctcgcgaccgagtgcgcagtggcgtggagccaggcgcaggattccggtggc
ccgtcgatcgtgttgcgcgccaagcatttcgtgttcgacaagctggtctacgcgaagctg
cggaccgctctcggcggcaagtgcgaactcgccatctcgggcggcgcaccactgggagcg
cgactcggccacttctaccgcggcatcggcgtaaccatctacgagggctacggcctgacc
gaaaccactgcggcgttcgcggtgaacaccatcggattccaacgtgtgggcagcgtcgga
cgcccgctacccgggaacaccgtccgcatcgccggcgacggtgagatccaactacgcgga
cccgttgtgttcgacgggtattggcgaaatgagaaggcgaccgcggaatccctcgacgac
ggatggttccgcaccggcgatctcggatccgtcgacgaggagggatacatcacgatctcc
ggccgcaagaaggaactgatcgtcaccgccggcggcaagaacgtctcccccgcgggcctc
gaagatcaccttcgcgccggagcactgatcagtcaggccgtggtggtcggtgaccagaag
cccttcatcggtgccctcatcaccctggatccggatgcgttcgacaagtggaagtccgca
cacggcaaggactccgacgccaccgcagcggatctgcaggccgaccccgatctcgtcgcc
gagatcgacgccgccgtcgccgatgccaacaagtcggtctcgcacgcggaatccatcaag
aagtaccgcctgctcccccacgacttctcggaggagagcggcgaattgacgccgacgatg
aagctcaagcgcaatgtcatcaccaaggcgtacgccgacgagatcgaggcgatctacgcg
aggtga
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